Results 31 to 40 of about 9,543 (298)

Nuclear eDNA metabarcoding primers for anthozoan coral biodiversity assessment. [PDF]

PeerJ, 2023
The distributions of anthozoan corals are undercharacterized due to their wide bathymetric ranges, occurrences in remote locales, and difficulties of identification from morphology alone. Environmental DNA (eDNA) sequencing promises to be a noninvasive strategy to complement conventional approaches for mapping and monitoring the ...
McCartin L, Saso E, Vohsen SA, Pittoors N, Demetriades P, McFadden CS, Quattrini AM, Herrera S.   +7 more
europepmc   +4 more sources

Harnessing eDNA metabarcoding to investigate fish community composition and its seasonal changes in the Oslo fjord. [PDF]

Sci Rep
Carvalho CO, Gromstad W, Dunthorn M, Karlsen HE, Schrøder-Nielsen A, Ready JS, Haugaasen T, Sørnes G, de Boer H, Mauvisseau Q.   +9 more
europepmc   +3 more sources

A Comparative Analyzing of Zooplankton Community Diversity in Surface Layer Water of Reservoir Via eDNA Metabarcoding and Microscopy

Diversity, 2022
We compared two sampling methods, eDNA metabarcoding and microscope identification (MSI), for the analysis of zooplankton diversity in reservoirs with its inflow and outflow streams. The dynamic patterns of Cladocera and Rotifera at different time points
Chang Woo Ji, Hye-Ji Oh, Kwang-Hyeon Chang, Young-Seuk Park, Ihn-Sil Kwak   +4 more
doaj   +1 more source

Environmental DNA metabarcoding of water samples as a tool for monitoring Iberian freshwater fish composition.

PLoS ONE, 2023
Environmental DNA (eDNA) metabarcoding has been increasingly used to monitor the community assemblages of a wide variety of organisms. Here, we test the efficacy of eDNA metabarcoding to assess the composition of Iberian freshwater fishes, one of the ...
Andrea Corral-Lou, Ignacio Doadrio
doaj   +1 more source

Environmental DNA metabarcoding from flowers reveals arthropod pollinators, plant pests, parasites, and potential predator–prey interactions while revealing more arthropod diversity than camera traps

Environmental DNA, 2023
Arthropods can strongly impact ecosystems through pollination, herbivory, predation, and parasitism. As such, characterizing arthropod biodiversity is vital to understanding ecosystem health, functions, and services.
Mark D. Johnson, Aron D. Katz, Mark A. Davis, Sasha Tetzlaff, David Edlund, Sonia Tomczyk, Brenda Molano‐Flores, Tim Wilder, Jinelle H. Sperry   +8 more
doaj   +1 more source

Important fish diversity maintenance status of the tributaries in a hotspot fish conservation area in the upper Yangtze River revealed by eDNA metabarcoding. [PDF]

Sci Rep
Shen Y, Zhou X, Zhang Y, Zhang J, Li Q, Chen Q, Liu Z, Li Y, Cheng R, Luo Y.   +9 more
europepmc   +2 more sources

Fish eDNA metabarcoding from aquatic biofilm samples: Methodological aspects

Molecular Ecology Resources, 2021
AbstractFish eDNA metabarcoding is usually performed from filtered water samples. The volume of filtered water depends on the study scope and can rapidly become time consuming according to the number of samples that have to be processed. To avoid time allocated to filtration, passive DNA samplers have been used to recover fish eDNA from marine ...
Rivera, Sinziana, Rimet, Frédéric, Vasselon, Valentin, Vautier, Marine, Domaizon, Isabelle, Bouchez, Agnes   +5 more
openaire   +4 more sources

eDNA Metabarcoding Benchmarked towards Conventional Survey Methods in Amphibian Monitoring [PDF]

Animals, 2022
A keystone in protection work is accurate and thorough the monitoring of amphibian species, and the currently applied conventional survey methods are invasive, time-consuming, and dependent on expert knowledge. Research suggests that eDNA metabarcoding is a precise and cost-efficient method that could supplement the currently applied methods.
Anne Katrine Nørgaard Svenningsen, Cino Pertoldi, Dan Bruhn   +2 more
openaire   +3 more sources

Optimization of environmental DNA extraction and amplification methods for metabarcoding of deep-sea fish

MethodsX, 2021
Analyses of environmental DNA (eDNA) from macroorganisms in aquatic environments have greatly advanced in recent years. In particular, eDNA metabarcoding of fish using universal PCR primers has been reported in various waters.
Masaru Kawato, Takao Yoshida, Masaki Miya, Shinji Tsuchida, Yuriko Nagano, Michiyasu Nomura, Akinori Yabuki, Yoshihiro Fujiwara, Katsunori Fujikura   +8 more
doaj   +1 more source

Using environmental DNA for detection of Batrachochytrium salamandrivorans in natural water [PDF]

, 2020
Rapid, early, and reliable detection of invasive pathogenic microorganisms is essential in order to either predict or delineate an outbreak, and monitor appropriate mitigation measures. The chytrid fungus Batrachochytrium salamandrivorans is expanding in
DeJean, Tony, dI&I I&I-4, Gilbert, Maarten, Herder, Jelger, Janse, Jöran, Martel, An, Pasmans, Frank, Spitzen ‐ van der Sluijs, Annemarieke, Stark, Tariq, Valentini, Alice, Verbrugghe, Elin   +10 more
core   +2 more sources