The Role of Host Genetic Signatures on Root–Microbe Interactions in the Rhizosphere and Endosphere [PDF]
Frontiers in Plant Science, 2018 Microbiomes inhabiting plants are crucial for plant productivity and well-being. A plethora of interactions between roots, microbiomes, and soil shapes the self-organization of the microbial community associated with the root system. The rhizosphere (i.e.
Frank Hochholdinger
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Journal of Fungi (Basel, Switzerland)This study used the ITS approach based on Illumina MiSeq sequencing to assess the endosphere and rhizosphere fungal communities in healthy and diseased faba bean plants. The findings indicate that the most predominant phyla in all samples were Ascomycota
Yujiao Liu
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Metabolic functions of Pseudomonas fluorescens strains from Populus deltoides depend on rhizosphere or endosphere isolation compartment [PDF]
Frontiers in Microbiology, 2015 The bacterial microbiota of plants is diverse, with 1,000s of operational taxonomic units (OTUs) associated with any individual plant. In this work we investigate the differences between 19 sequenced Pseudomonas fluorescens strains, isolated from Populus
Michael S Robeson +2 more
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Comparative Study of the Rhizosphere and Root Endosphere Microbiomes of Cholistan Desert Plants [PDF]
Frontiers in Microbiology, 2021 Microbial communities associated with the rhizosphere and roots of desert halophytes play an important role in plants’ growth and development. Very limited information has been available on the microbial diversity of arid environments of Pakistan.
Salma Mukhtar +2 more
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Land Management and Microbial Seed Load Effect on Rhizosphere and Endosphere Bacterial Community Assembly in Wheat [PDF]
Frontiers in Microbiology, 2019 Microbial community ecology studies have traditionally utilized culture-based methodologies, though the advent of next-generation amplicon sequencing has facilitated superior resolution analyses of complex microbial communities.
Vanessa Nessner Kavamura +2 more
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Putative Nitrogen-Fixing Bacteria Associated With the Rhizosphere and Root Endosphere of Wheat Plants Grown in an Andisol From Southern Chile [PDF]
Frontiers in Microbiology, 2018 Acidic ash derived volcanic soils (Andisols) support 50% of cereal production in Chile. Nitrogen (N) is essential for cereal crops and commonly added as urea with consequent environmental concerns due to leaching.
Michael J Sadowsky +2 more
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Pyrosequencing detects human and animal pathogenic taxa in the grapevine endosphere [PDF]
Frontiers in Microbiology, 2014 Generally, plants are not considered as hosts for human and animal pathogens (HAP). The recent produce-associated outbreaks of food-borne diseases have drawn attention towards significant deficiencies in our understanding of the ecology of HAP, and their
Paola Casati +2 more
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Effects of frequency and amount of stover mulching on the microbial community composition and structure in the endosphere and rhizosphere [PDF]
Frontiers in MicrobiologyStover mulching, as a sustainable agricultural conservation practice, has been shown to effectively increase soil organic matter and enhance crop yields. The impact of stover mulching on soil microorganisms has been extensively studied.
Haowen Li +4 more
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Phylogenetic Divergence and Domestication Jointly Shape the Tomato Root Microbiome [PDF]
PlantsDomestication reduced the genetic diversity in modern crops, often resulting in reduced resilience to biotic and abiotic stress. Evidence is now accumulating that domestication also altered the structure and function of root-associated microbiomes ...
Grigorios Thomaidis +3 more
doaj +2 more sources
The wilt pathogen induces different variations of root-associated microbiomes of plant
Frontiers in Plant Science, 2022 Root-associated compartments, including the rhizosphere, rhizoplane, and endosphere, live with diverse microbial communities which profoundly affect plant growth and health.
Jiemeng Tao +8 more
doaj +1 more source