Comparative mapping in the Fagaceae and beyond with EST-SSRs [PDF]
BMC Plant Biology, 2012 Background Genetic markers and linkage mapping are basic prerequisites for comparative genetic analyses, QTL detection and map-based cloning. A large number of mapping populations have been developed for oak, but few gene-based markers are available for ...
Bodénès Catherine +17 more
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Characterization and Development of EST-SSRs by Deep Transcriptome Sequencing in Chinese Cabbage (Brassica rapa L. ssp. pekinensis) [PDF]
International Journal of Genomics, 2015 Simple sequence repeats (SSRs) are among the most important markers for population analysis and have been widely used in plant genetic mapping and molecular breeding.
Qian Ding +6 more
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Discovery of EST-SSRs in lung cancer: tagged ESTs with SSRs lead to differential amino acid and protein expression patterns in cancerous tissues. [PDF]
PLoS ONE, 2011 Tandem repeats are found in both coding and non-coding sequences of higher organisms. These sequences can be used in cancer genetics and diagnosis to unravel the genetic basis of tumor formation and progression.
Mohammad Reza Bakhtiarizadeh +2 more
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Development and Characterization of Novel EST-SSRs from Larix gmelinii and Their Cross-Species Transferability [PDF]
Molecules, 2015 Zhang G +6 more
exaly +2 more sources
Frontiers in Marine Science, 2021 Elongate loach (Leptobotia elongata) is endemic to middle and upper reaches of the Yangtze River in China. Due to overfishing and habitat destruction, this loach has become an endangered species. So far, lack of reliable genetic information and molecular
Yunbang Zhang +6 more
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Development and characterization of polymorphic EST-SSR and genomic SSR markers for Tibetan annual wild barley. [PDF]
PLoS ONE, 2014 Tibetan annual wild barley is rich in genetic variation. This study was aimed at the exploitation of new SSRs for the genetic diversity and phylogenetic analysis of wild barley by data mining.
Mian Zhang +3 more
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Development of genic and genomic SSR markers of robusta coffee (Coffea canephora Pierre Ex A. Froehner). [PDF]
PLoS ONE, 2014 Coffee breeding and improvement efforts can be greatly facilitated by availability of a large repository of simple sequence repeats (SSRs) based microsatellite markers, which provides efficiency and high-resolution in genetic analyses.
Prasad S Hendre, Ramesh K Aggarwal
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Development and Characterization of 18 Novel EST-SSRs from the Western Flower Thrips, Frankliniella occidentalis (Pergande) [PDF]
International Journal of Molecular Sciences, 2012 Xiao-Yue Hong +2 more
exaly +2 more sources
Characterization and Transferable Utility of Microsatellite Markers in the Wild and Cultivated Arachis Species. [PDF]
PLoS ONE, 2016 Microsatellite or simple sequence repeat (SSR) is one of the most widely distributed molecular markers that have been widely utilized to assess genetic diversity and genetic mapping for important traits in plants.
Li Huang +11 more
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Exploitation of Malus ESTs for development of SSR markers after in silico analysis
Journal of Applied Botany and Food Quality, 2015 The domestic apple (Malus X domestica) has been extensively characterized for EST sequences and currently 330181 ESTs are available in NCBI. Although this is a valuable resource for marker development but the redundancy in sequences makes the mining out ...
Era Vaidya +3 more
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