Results 21 to 30 of about 3,154,512 (215)

Development and Characterization of Expressed Sequence-tagged Simple Sequence Repeat Markers for Denphal-type Dendrobium Cultivars and Transferability to Dendrobium Species

Journal of the American Society for Horticultural Science, 2022
Denphal-type Dendrobium is the most popular orchid for cut flower and potted plant trade. To improve commercial traits, many novel cultivars have been produced through hybridization by commercial breeders.
Shuangshuang Yi , Mingzhong Huang, Guangsui Yang , Junhai Niu , Shunjiao Lu, Junmei Yin , Zhiqun Zhang   +6 more
doaj   +1 more source

Development and test of 21 multiplex PCRs composed of SSRs spanning most of the apple genome [PDF]

, 2009
A series of 21 multiplex (MP) polymerase chain reactions containing simple sequence repeat (SSR) markers spanning most of the apple genome has been developed. Eighty-eight SSR markers, well distributed over all 17 linkage groups (LGs), have been selected.
Rikkerink, E., Weg, W.E., van de, Komjanc, Matteo, Komjanc, M, L. Kodde, V. Cova, Barbaro, E, Gobbin, Davide, Boudichevskaia, A., E. Barbaro, Dunemann, F, Fernandez-Fernandez, F, Kodde, L.P., Mott, D, Cova, Valentina, Stankiewicz-Kosyl, M., Stankiewicz Kosyl, M., Durel, C. E., Gessler, C., C. E. Durel, Cova, V, Gessler,C., Toller, C., Dunemann, F., A. Boudichevskaia, Dunemann, Frank, Mott, Daniela, Fernandez Fernandez, F., W. E. van de Weg, Weg, W.E. van de, Van De Weg, W. E., K. Evans, Patocchi, Andrea, Rezzonico, F, E. Rikkerink, Gianfranceschi, Luca, Rezzonico, Fabio, Fernandez-Fernandez, F., Mathis-Jeanneteau, F., Boudichevskaja, A., Barbaro, Enrico, D. Mott, Gobbin, D, Toller, Chiara, F. Fernandez Fernandez, F. Rezzonico, Evans, K., Komjanc, M., F. Dunemann, Patocchi, A., Rikkerink, E.H.A., D. Gobbin, Barbaro, E., Toller, C, Costa, Fabrizio, Durel, Charles Eric, Rikkerink, E, A. Patocchi, Cova, V., M. Stankiewicz Kosyl, Mathis Jeanneteau, F., C. Gessler, L. Gianfranceschi, Kodde, L., Gianfranceschi, L., Mott, D., Evans, K, Boudichevskaia, A, M. Komjanc, Gobbin, D., Costa, F., Gianfranceschi, L, Durel, C.E., F. Mathis Jeanneteau, Stankiewicz-Kosyl, M, F. Costa, C. Toller, Van de Weg, W.E, Mathis, Fabienne, Gessler, Cesare, Kodde, L, Rezzonico, F., van de Weg, W.E.   +82 more
core   +1 more source

Development of genic and genomic microsatellites in Gleditsia triacanthos L. (Fabaceae) using Illumina sequencing

Annals of Forest Research, 2017
Twenty new polymorphic genic SSRs (EST-SSRs) and 13 genomic SSRs were developed in honeylocust (Gleditsia triacanthos) using Illumina transcriptome and low-coverage genome sequencing.
Yawen Wu, Ruhua Zhang, Margaret Staton, Scott E. Schlarbaum, Mark V. Coggeshall, Jeanne Romero-Severson, John E. Carlson, Haiying Liang, Yi Xu, Daniela I. Drautz-Moses, Stephan C. Schuster, Oliver Gailing   +11 more
doaj   +1 more source

An EST-SSR based genetic linkage map and identification of QTLs for anthracnose disease resistance in water yam (Dioscorea alata L.). [PDF]

PLoS ONE, 2018
Water yam (Dioscorea alata L.) is one of the most important food yams with wide geographical distribution in the tropics. One of the major constraints to water yam production is anthracnose disease caused by a fungus, Colletotrichum gloeosporioides (Penz.
Ranjana Bhattacharjee, Christian O Nwadili, Christopher A Saski, Agre Paterne, Brian E Scheffler, Joao Augusto, Antonio Lopez-Montes, Joseph T Onyeka, P Lava Kumar, Ranajit Bandyopadhyay   +9 more
doaj   +1 more source

First Microsatellite Markers Developed from Cupuassu ESTs: Application in Diversity Analysis and Cross-Species Transferability to Cacao. [PDF]

PLoS ONE, 2016
The cupuassu tree (Theobroma grandiflorum) (Willd. ex Spreng.) Schum. is a fruitful species from the Amazon with great economical potential, due to the multiple uses of its fruit´s pulp and seeds in the food and cosmetic industries, including the ...
Lucas Ferraz Dos Santos, Roberta Moreira Fregapani, Loeni Ludke Falcão, Roberto Coiti Togawa, Marcos Mota do Carmo Costa, Uilson Vanderlei Lopes, Karina Peres Gramacho, Rafael Moyses Alves, Fabienne Micheli, Lucilia Helena Marcellino   +9 more
doaj   +1 more source

A second generation framework for the analysis of microsatellites in expressed sequence tags and the development of EST-SSR markers for a conifer, Cryptomeria japonica

BMC Genomics, 2012
Background Microsatellites or simple sequence repeats (SSRs) in expressed sequence tags (ESTs) are useful resources for genome analysis because of their abundance, functionality and polymorphism.
Ueno Saneyoshi, Moriguchi Yoshinari, Uchiyama Kentaro, Ujino-Ihara Tokuko, Futamura Norihiro, Sakurai Tetsuya, Shinohara Kenji, Tsumura Yoshihiko   +7 more
doaj   +1 more source

Cross species transferability of G-SSR and EST-SSR markers to Neltuma affinis Spreng.

Forest Systems, 2023
Aim of study: To examine the transferability of G-SSR (genomic simple sequence repeats) and EST-SSR (expressed sequence tag simple sequence repeats) markers developed for several Neltuma species to N. affinis, a species with no genomic data.
María C. Soldati, Gregorio Gavier-Pizarro, Matías Morales, María F. Pomponio, Noga Zelener   +4 more
doaj   +1 more source

Leaf morphological and genetic variation between Quercus rubra and Quercus ellipsoidalis: comparison of sympatric and parapatric populations

Annals of Forest Research, 2018
Species boundaries in oaks are often not clear-cut, which is potentially a result of interspecific hybridization with trait introgression and phenotypic plasticity. Quercus rubra L. and Quercus ellipsoidalis E.J.
Oliver Gailing, Sarah Kostick, Oliver Caré, Sudhir Khodwekar   +3 more
doaj   +1 more source

Development of EST-SSRs in Brassica napus

Korean Journal of Breeding Science, 2012
EST-SSRs were developed in Brassica napus by database mining. We isolated 7,802 EST-SSRs from the B. napus 643,946 ESTs deposited in the NCBI. With the cut-off value of >10 repeats in di-nucleotide repeats and >7 tri-nucleotide repeats, 303 ESTs were suitable for primer designing for PCR amplification. Of the sixteen possible di-nucleotide combinations,
Kyong-Cheul Park, Nam-Soo Kim, Man-Woong Ha, Jae-Han Son, Young-Sup Lee, Sung-Il Lee, Young-Suk Chang, Kwang-Soo Kim   +7 more
openaire   +1 more source

Cross-Species, Amplifiable EST-SSR Markers for Amentotaxus Species Obtained by Next-Generation Sequencing

Molecules, 2016
Amentotaxus, a genus of Taxaceae, is an ancient lineage with six relic and endangered species. Four Amentotaxus species, namely A. argotaenia, A. formosana, A. yunnanensis, and A.
Chiuan-Yu Li, Tzen-Yuh Chiang, Yu-Chung Chiang, Hsin-Mei Hsu, Xue-Jun Ge, Chi-Chun Huang, Chaur-Tzuhn Chen, Kuo-Hsiang Hung   +7 more
doaj   +1 more source