Results 101 to 110 of about 49,374 (223)

In a nutshell: pistachio genome and kernel development

New Phytologist, Volume 246, Issue 3, Page 1032-1048, May 2025.
Summary Pistachio is a sustainable nut crop with exceptional climate resilience and nutritional value. However, the molecular processes underlying pistachio nut development and nutritional traits are largely unknown, compounded by limited genomic and molecular resources.
Jaclyn A. Adaskaveg, Chaehee Lee, Yiduo Wei, Fangyi Wang, Filipa S. Grilo, Saskia D. Mesquida‐Pesci, Matthew Davis, Selina C. Wang, Giulia Marino, Louise Ferguson, Patrick J. Brown, Georgia Drakakaki, Adela Mena Morales, Annalisa Marchese, Antonio Giovino, Esaú Martínez Burgos, Francesco Paolo Marra, Lourdes Marchante Cuevas, Luigi Cattivelli, Paolo Bagnaresi, Pablo Carbonell‐Bejerano, J. Grey Monroe, Barbara Blanco‐Ulate   +22 more
wiley   +1 more source

Maximum-likelihood tree estimation using codon substitution models with multiple partitions [PDF]

, 2015
Erworben im Rahmen der Schweizer Nationallizenzen (http://www.nationallizenzen.ch)Many protein sequences have distinct domains that evolve with different rates, different selective pressures, or may differ in codon bias.
Anisimova, Maria, Boskova, Veronika, Zoller, Stefan   +2 more
core   +1 more source

Diversity and Functional Roles of Microorganisms in Anatolian Black Pine Cone Vinegar Fermentation

Food Science &Nutrition, Volume 13, Issue 4, April 2025.
The pine cone vinegar has been analyzed for its microbial community using cultural methods and metagenomic analysis, as well as its aroma components, total phenolic content, antioxidant capacity, and organic acids. The results provide valuable information on the sensory properties, aroma volatiles, antimicrobial effect, and relationship with the ...
Duygu Alp‐Baltakesmez, Pelin Ertürkmen, Özcan Bulantekin   +2 more
wiley   +1 more source

The largest reservoir of mitochondrial introns is a relic of an ancestral split gene [PDF]

, 2010
In eukaryotes, introns are located in nuclear and organelle genes from several kingdoms (ref. 1-4). Large introns (0.1 to 5 kbp) are frequent in mitochondrial genomes of plant and fungi (ref.
Cyril Ferandon, Gerard Barroso, Jean-Pierre Benedetto, Michel Castroviejo, Philippe Callac, Serge Moukha   +5 more
core   +1 more source

Monitoring Functional Posttranslational Modifications Using a Data‐Driven Proteome Informatic Pipeline

PROTEOMICS, Volume 25, Issue 8, April 2025.
ABSTRACT Posttranslational modifications (PTMs) are of significant interest in molecular biomedicine due to their crucial role in signal transduction across various cellular and organismal processes. Characterizing PTMs, distinguishing between functional and inert modifications, quantifying their occupancies, and understanding PTM crosstalk are ...
Payman Nickchi, Uladzislau Vadadokhau, Mehdi Mirzaie, Marc Baumann, Amir A. Saei, Mohieddin Jafari   +5 more
wiley   +1 more source

Disordered patterns in clustered Protein Data Bank and in eukaryotic and bacterial proteomes. [PDF]

PLoS ONE, 2011
We have constructed the clustered Protein Data Bank and obtained clusters of chains of different identity inside each cluster, http://bioinfo.protres.ru/st_pdb/.
Michail Yu Lobanov, Oxana V Galzitskaya
doaj   +1 more source

α/β Hydrolases: Toward Unraveling Entangled Classification

Proteins: Structure, Function, and Bioinformatics, Volume 93, Issue 4, Page 855-870, April 2025.
ABSTRACT α/β Hydrolase‐like enzymes form a large and functionally diverse superfamily of proteins. Despite retaining a conserved structural core consisting of an eight‐stranded, central β‐sheet flanked with six α‐helices, they display a modular architecture allowing them to perform a variety of functions, like esterases, lipases, peptidases, epoxidases,
Fatih Ozhelvaci, Kamil Steczkiewicz
wiley   +1 more source

Flowering Plant Microbiomes and Network Interactions Across an Urban Gradient

Environmental Microbiology, Volume 27, Issue 4, April 2025.
Analysis of plant anthosphere microbiomes reveals that the bacterial and fungal microbiomes are diverse in the plant community with no effect of urbanisation. Highly prevalent and abundant bacteria and fungi tend to significantly co‐occur. Detections of rbcL in flower‐plant networks identify Paulownia sp.
Katherine D. Chau, Makaylee K. Crone, Phuong N. Nguyen, Sandra M. Rehan   +3 more
wiley   +1 more source

Year‐Round Quantification, Structure and Dynamics of Epibacterial Communities From Diverse Macroalgae Reveal a Persistent Core Microbiota and Strong Host Specificities

Environmental Microbiology Reports, Volume 17, Issue 2, April 2025.
We conducted a year‐long monthly epimicrobiota sampling on five algal species inhabiting an English Channel rocky shore, combining qPCR measurements of 16S rRNA gene copies with amplicon metabarcoding. Algal host emerged as the primary driver of epibacterial community composition, before seasonality.
Maéva Brunet, Nolwen Le Duff, Tristan Barbeyron, François Thomas   +3 more
wiley   +1 more source

Temporal and Depth‐Driven Variability of Pelagic Bacterial Communities in Lake Erie: Biofilm and Plankton Dynamics

Environmental Microbiology Reports, Volume 17, Issue 2, April 2025.
Biofilm and planktonic bacterial communities in Lake Erie's western basin show distinct compositions, with only ~10% shared ASVs. While plankton communities remain consistent across depths, biofilms exhibit depth‐ and time‐dependent variability, with early‐summer communities differing before converging in late summer.
Rylie L. Robinson, Aaron T. Fisk, Sophie Crevecoeur   +2 more
wiley   +1 more source