Results 41 to 50 of about 33,209,906 (421)

Towards knowledge-based gene expression data mining [PDF]

, 2007
The field of gene expression data analysis has grown in the past few years from being purely data-centric to integrative, aiming at complementing microarray analysis with data and knowledge from diverse available sources. In this review, we report on the
Allison, Andersson, Ashburner, Bar-Joseph, Bar-Joseph, Batagelj, Bernard, Blaž Zupan, Bolshakova, Brown, Cheng, Cheng, Cho, Clayton, Cooper, Curk, Datta, de Jong, D’Haeseleer, Eisen, Falcon, Friedman, Gamberger, Gavin, Geiger, Guo, Hand, Hand, Hastie, Huang, Hughes, Hughes, Hvidsten, Imoto, Jeffery, Jiang, Khan, Khatri, King, Kong, Lai, Le Phillip, Li, Liang, Lin, Mewes, Mitchell, Moskovitch, Nariai, Pan, Prelic, Qin, Raftery, Resnik, Riccardo Bellazzi, Riva, Rousu, Ruepp, Sacchi, Schlitt, Sebastiani, Shahar, Simon, Statnikov, Stuart, Subramanian, Tamada, Tamayo, Troyanskaya, van de Peppel, Van Driessche, Wang, Witten, Xing, Zupan   +74 more
core   +1 more source

SCANPY: large-scale single-cell gene expression data analysis

Genome Biology, 2018
Scanpy is a scalable toolkit for analyzing single-cell gene expression data. It includes methods for preprocessing, visualization, clustering, pseudotime and trajectory inference, differential expression testing, and simulation of gene regulatory ...
F. A. Wolf, Philipp Angerer, Fabian J Theis   +2 more
semanticscholar   +1 more source

Calcium sensing by the STIM1 ER-luminal domain

Nature Communications, 2018
Stromal interaction molecule 1 (STIM1) monitors ER-luminal Ca2 + levels to maintain cellular Ca2 + balance. Here the authors find that the STIM1 luminal domain monomer has multiple Ca2 + - binding sites which set the threshold for physiological ...
Aparna Gudlur, Ana Eliza Zeraik, Nupura Hirve, V. Rajanikanth, Andrey A. Bobkov, Guolin Ma, Sisi Zheng, Youjun Wang, Yubin Zhou, Elizabeth A. Komives, Patrick G. Hogan   +10 more
doaj   +1 more source

Genome-wide analysis of the fasciclin-like arabinogalactan protein gene family reveals differential expression patterns, localization and salt stress response in Populus

Frontiers in Plant Science, 2015
Fasciclin-like arabinogalactan proteins (FLAs) are a subclass of arabinogalactan proteins (AGPs) involved in plant growth, development and response to abiotic stress. Although many studies have been performed to identify molecular functions of individual
Lina eZang, Lina eZang, Tangchun eZheng, Yanguang eChu, Yanguang eChu, Changjun eDing, Changjun eDing, Weixi eZhang, Weixi eZhang, Qinjun eHuang, Qinjun eHuang, Xiaohua eSu, Xiaohua eSu   +12 more
doaj   +1 more source

Gene expression reliability estimation through cluster-based analysis [PDF]

, 2009
Gene expression is the fundamental control of the structure and functions of the cellular versatility and adaptability of any organisms. The measurement of gene expressions is performed on images generated by optical inspection of microarray devices ...
Benso, Alfredo, Di Carlo.S., Politano, Gianfranco Michele Maria, Sterpone, Luca   +3 more
core   +1 more source

Gene expression data analysis

Microbes and Infection, 2000
Microarrays are one of the latest breakthroughs in experimental molecular biology, which allow monitoring of gene expression for tens of thousands of genes in parallel and are already producing huge amounts of valuable data. Analysis and handling of such data is becoming one of the major bottlenecks in the utilization of the technology.
Jaak Vilo, Alvis Brazma
openaire   +5 more sources

A Survey of Automatic Facial Micro-Expression Analysis: Databases, Methods, and Challenges [PDF]

Frontiers in Psychology, 2018
Over the last few years, automatic facial micro-expression analysis has garnered increasing attention from experts across different disciplines because of its potential applications in various fields such as clinical diagnosis, forensic investigation and
Yee-Hui Oh, John See, A. Ngo, R. Phan, Vishnu Monn Baskaran   +4 more
semanticscholar   +1 more source

A new Na+/H+ antiporter gene KvNHX1 isolated from the halophyte Kosteletzkya virginica improves salt tolerance in transgenic tobacco

Biotechnology & Biotechnological Equipment, 2018
Vacuolar Na+/H+ antiporters (NHXs) play an important role in plant salt tolerance and a large number of NHX genes have been identified in many plant species.
Hongyan Wang, Qiang Ding, Honglei Wang
doaj   +1 more source

Identification and Expression Profiling of Chemosensory Genes in Hermetia illucens via a Transcriptomic Analysis

Frontiers in Physiology, 2020
The black soldier fly, Hermetia illucens, is a cosmopolitan insect of the family Stratiomyidae (Diptera). Chemosensory genes encode proteins involved directly in the detection of odorants.
Qiyun Xu, Qiyun Xu, Zhongzhen Wu, Xinnian Zeng, Xincheng An   +4 more
doaj   +1 more source

Differential Expression Analysis for Pathways

PLoS Computational Biology, 2013
Life science technologies generate a deluge of data that hold the keys to unlocking the secrets of important biological functions and disease mechanisms. We present DEAP, Differential Expression Analysis for Pathways, which capitalizes on information about biological pathways to identify important regulatory patterns from differential expression data ...
Roger Higdon, Roger Higdon, Eugene Kolker, Winston A. Haynes, Dwayne Collins, Larissa Stanberry, Larissa Stanberry   +6 more
openaire   +5 more sources