Results 11 to 20 of about 1,293,810 (280)

OME-Zarr: a cloud-optimized bioimaging file format with international community support. [PDF]

Histochem Cell Biol, 2023
Moore J, Basurto-Lozada D, Besson S, Bogovic J, Bragantini J, Brown EM, Burel JM, Casas Moreno X, de Medeiros G, Diel EE, Gault D, Ghosh SS, Gold I, Halchenko YO, Hartley M, Horsfall D, Keller MS, Kittisopikul M, Kovacs G, Küpcü Yoldaş A, Kyoda K, le Tournoulx de la Villegeorges A, Li T, Liberali P, Lindner D, Linkert M, Lüthi J, Maitin-Shepard J, Manz T, Marconato L, McCormick M, Lange M, Mohamed K, Moore W, Norlin N, Ouyang W, Özdemir B, Palla G, Pape C, Pelkmans L, Pietzsch T, Preibisch S, Prete M, Rzepka N, Samee S, Schaub N, Sidky H, Solak AC, Stirling DR, Striebel J, Tischer C, Toloudis D, Virshup I, Walczysko P, Watson AM, Weisbart E, Wong F, Yamauchi KA, Bayraktar O, Cimini BA, Gehlenborg N, Haniffa M, Hotaling N, Onami S, Royer LA, Saalfeld S, Stegle O, Theis FJ, Swedlow JR.   +68 more
europepmc   +3 more sources

OME-NGFF: a next-generation file format for expanding bioimaging data-access strategies. [PDF]

Nat Methods, 2021
Moore J, Allan C, Besson S, Burel JM, Diel E, Gault D, Kozlowski K, Lindner D, Linkert M, Manz T, Moore W, Pape C, Tischer C, Swedlow JR.   +13 more
europepmc   +2 more sources

CRAM 3.1: advances in the CRAM file format. [PDF]

Bioinformatics, 2022
Bonfield JK.
europepmc   +2 more sources

Experimental Directory Structure (Exdir): An Alternative to HDF5 Without Introducing a New File Format. [PDF]

Front Neuroinform, 2018
Dragly SA, Hobbi Mobarhan M, Lepperød ME, Tennøe S, Fyhn M, Hafting T, Malthe-Sørenssen A.   +6 more
europepmc   +2 more sources

HDF5 and row-wise ntuple in analysis tools in Geant4 10.4 [PDF]

EPJ Web of Conferences, 2019
The analysis category was introduced in Geant4 release 9.5 to help users capture statistical data in the form of histograms and ntuples and store these in files in various formats.
Barrand Guy, Hˇrivnácˇová Ivana
doaj   +1 more source

Medical Image File Formats [PDF]

Journal of Digital Imaging, 2013
Image file format is often a confusing aspect for someone wishing to process medical images. This article presents a demystifying overview of the major file formats currently used in medical imaging: Analyze, Neuroimaging Informatics Technology Initiative (Nifti), Minc, and Digital Imaging and Communications in Medicine (Dicom).
Larobina Michele, Murino Loredana
openaire   +4 more sources

Unified Nanotechnology Format: One Way to Store Them All

Molecules, 2021
The domains of DNA and RNA nanotechnology are steadily gaining in popularity while proving their value with various successful results, including biosensing robots and drug delivery cages.
David Kuťák, Erik Poppleton, Haichao Miao, Petr Šulc, Ivan Barišić   +4 more
doaj   +1 more source

File-based storage of Digital Objects and constituent datastreams: XMLtapes and Internet Archive ARC files [PDF]

, 2005
This paper introduces the write-once/read-many XMLtape/ARC storage approach for Digital Objects and their constituent datastreams. The approach combines two interconnected file-based storage mechanisms that are made accessible in a protocol-based manner.
Balakireva, Lyudmila, Hochstenbach, Patrick, Liu, Xiaoming, Van de Sompel, Herbert   +3 more
core   +3 more sources

Graphic File Formats

EDIS, 2021
This publication on graphic file formats is the fourth of a five-part series on document design. This series also covers the document design process, principles of document design, elements of document design, and brochure and newsletter design. Previous version: Telg, Ricky. 2012. “Graphic File Formats”. EDIS 2012 (7). https://journals.flvc.org/edis/
Ashley McLeod-Morin, Ricky Telg
openaire   +4 more sources

The Biological Observation Matrix (BIOM) format or: how I learned to stop worrying and love the ome-ome

GigaScience, 2012
Background We present the Biological Observation Matrix (BIOM, pronounced “biome”) format: a JSON-based file format for representing arbitrary observation by sample contingency tables with associated sample and observation metadata.
McDonald Daniel, Clemente Jose C, Kuczynski Justin, Rideout Jai, Stombaugh Jesse, Wendel Doug, Wilke Andreas, Huse Susan, Hufnagle John, Meyer Folker, Knight Rob, Caporaso J   +11 more
doaj   +1 more source