Results 1 to 10 of about 221,689 (168)
The Wako-Saitô-Muñoz-Eaton Model for Predicting Protein Folding and Dynamics
Molecules, 2022 Despite the recent advances in the prediction of protein structures by deep neutral networks, the elucidation of protein-folding mechanisms remains challenging.
Koji Ooka, Runjing Liu, Munehito Arai
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Improved design of stable and fast-folding model proteins
Folding & Design, 1996 A number of approaches to design stable and fast-folding sequences for model polypeptide chains have been based on the premise that optimization of the relative energy of the native conformation (or Z-score) is sufficient to yield stable and fast-folding sequences. Although this approach has been successful, for longer chains it often yielded sequences
Eugene I Shakhnovich +2 more
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Error estimates for a linear folding model
IMA Journal of Numerical Analysis, 2023 Abstract An interior penalty discontinuous Galerkin method is devised to approximate minimizers of a linear folding model by discontinuous isoparametric finite element functions that account for an approximation of a folding arc. The numerical analysis of the discrete model includes an a priori error estimate in case of an accurate ...
Bartels, Soeren +2 more
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A Canonical Biomechanical Vocal Fold Model [PDF]
Journal of Voice, 2012 The present article aimed at constructing a canonical geometry of the human vocal fold (VF) from subject-specific image slice data. A computer-aided design approach automated the model construction. A subject-specific geometry available in literature, three abstractions (which successively diminished in geometric detail) derived from it, and a widely ...
Bhattacharya, P., Siegmund, T.H.
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On the integrability of the vocal fold model
Physica D: Nonlinear Phenomena, 2023 In this work the algebraic characterization of the Darboux, Liouville, and Puiseux first integrals of the vocal fold model is given. The multiple Puiseux solutions, also defined in Puiseux integrability, are studied for the first time.
Maria Demina +2 more
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Mechanisms of 13C(11B, 7Li)17O reaction at the 11B ion energy 45 MeV [PDF]
Ядерна фізика та енергетика, 2018 Reaction 13C(11B, 7Li)17O at the energy Еlab(11B) = 45 MeV for the ground and excited states of the 7Li and 17O nuclei was studied. The reaction experimental data were analyzed within the coupled-reaction-channels method (CRC).
S. Yu. Mezhevych +6 more
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A Comparison of Different Folding Models in Variations of the Map Folding Problem
Applied Sciences, 2021 In this paper, we compare the performance of three different folding models when they are applied to three different map folding settings. Precisely, the three folding models include the simple folding model, the simple folding–unfolding model, and the ...
Yiyang Jia, Jun Mitani
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Molecules, 2023 Investigations of protein folding have largely involved the use of disulfide-containing proteins, since the disulfide-coupled folding of proteins allows folding intermediates to be trapped and their conformations determined.
Nana Sakata +4 more
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Nature Communications, 2023 Recent breakthroughs in highly accurate protein structure prediction using deep neural networks have made considerable progress in solving the structure prediction component of the ‘protein folding problem’. However, predicting detailed mechanisms of how
Koji Ooka, Munehito Arai
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A folded model for compositional data analysis [PDF]
Australian & New Zealand Journal of Statistics, 2020 SummaryA folded type model is developed for analysing compositional data. The proposed model involves an extension of theα‐transformation for compositional data and provides a new and flexible class of distributions for modelling data defined on the simplex sample space.
Michail Tsagris, Connie Stewart
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