Results 11 to 20 of about 120,573 (301)

Certain detection of uncertain taxa: eDNA detection of a cryptic mountain sucker (Pantosteus jordani) in the Upper Missouri River, USA

Environmental DNA, 2021
A lineage of the Mountain Sucker species complex (Pantosteus jordani) exists as a genetically and morphologically distinct taxon restricted to the Missouri River basin.
Daniel H. Mason, Joseph C. Dysthe, Thomas W. Franklin, Chris L. Williams, Michael K. Young, Kevin S. McKelvey, Michael K. Schwartz   +6 more
doaj   +1 more source

Assessing the adoption and impact of genomics research at the Canadian Forest Service

The Forestry Chronicle, 2017
The outcomes and impacts of government scientific research are difficult to evaluate, yet there is a growing demand for quantification of these impacts. Forest and forestry-related research is no exception. We adapted an impact assessment methodology for
Emily S. Hope, Debby C. Barsi, Daniel W. McKenney   +2 more
doaj   +1 more source

Detection of Jaguar (Panthera onca) From Genetic Material in Drinking Water

Frontiers in Ecology and Evolution, 2021
Jaguar (Panthera onca) are of conservation concern and occur at very low densities in the northern portion of their range in northern Mexico and the southwestern United States. Environmental DNA sampling to detect genetic material from drinking water may
Taylor M. Wilcox, Anthony Caragiulo, Joseph C. Dysthe, Thomas W. Franklin, Daniel H. Mason, Kevin S. McKelvey, Katherine E. Zarn, Michael K. Schwartz   +7 more
doaj   +1 more source

Stepwise large genome assembly approach: a case of Siberian larch (Larix sibirica Ledeb)

BMC Bioinformatics, 2019
Background De novo assembling of large genomes, such as in conifers (~ 12–30 Gbp), which also consist of ~ 80% of repetitive DNA, is a very complex and computationally intense endeavor.
Dmitry A. Kuzmin, Sergey I. Feranchuk, Vadim V. Sharov, Alexander N. Cybin, Stepan V. Makolov, Yuliya A. Putintseva, Natalya V. Oreshkova, Konstantin V. Krutovsky   +7 more
doaj   +1 more source

A catalog of annotated high-confidence SNPs from exome capture and sequencing reveals highly polymorphic genes in Norway spruce (Picea abies)

BMC Genomics, 2018
Background Norway spruce [Picea abies (L.) Karst.] is ecologically and economically one of the most important conifer worldwide. Our main goal was to develop a large catalog of annotated high confidence gene SNPs that should sustain the development of ...
Aïda Azaiez, Nathalie Pavy, Sébastien Gérardi, Jérôme Laroche, Brian Boyle, France Gagnon, Marie-Josée Mottet, Jean Beaulieu, Jean Bousquet   +8 more
doaj   +1 more source

Complete chloroplast sequence of Fenerivia ghesquiereana (Annonaceae): a rare and endemic tree from Madagascar

Mitochondrial DNA. Part B. Resources, 2021
Fenerivia ghesquiereana (Cavaco & Keraudren) R.M.K. Saunders (Annaonaceae) is a rare and endemic tree restricted to the warm tropical forests of Madagascar, a major global hotspot for biodiversity.
Yixi Wang, Tijana Cvetković, Amy N. A. Aritsara, Angelo D. A. Carrion, Joeri S. Strijk   +4 more
doaj   +1 more source

Genome resequencing reveals multiscale geographic structure and extensive linkage disequilibrium in the forest tree Populus trichocarpa [PDF]

, 2009
This is the publisher’s final pdf. The article is copyrighted by the New Phytologist Trust and published by John Wiley & Sons, Inc. It can be found at: http://onlinelibrary.wiley.com/journal/10.1111/%28ISSN%291469-8137.
Slavov, Gancho Trifonu, Difazio, Stephen P., Martin, Joel, Schackwitz, Wendy, Muchero, Wellington, Rodgers-Melnick, Eli, Lipphardt, Mindie F., Pennacchio, Christa P., Hellsten, Uffe, Pennacchio, Len A., Gunter, Lee E., Ranjan, Priya, Vining, Kelly, Pomraning, Kyle R., Wilhelm, Larry J., Pellegrini, Matteo, Mockler, Todd C., Freitag, Michael, Geraldes, Armando, El-Kassaby, Yousry A., Mansfield, Shawn D., Cronk, Quentin C. B., Douglas, Carl J., Strauss, Steven H., Rokhsar, Dan, Tuskan, Gerald A.   +25 more
core   +4 more sources

Favorable outcome of patients with lung adenocarcinoma harboring POLE mutations and expressing high PD-L1

Molecular Cancer, 2018
Mutations in polymerase ε (POLE) confer favorable prognosis and outcomes in various cancer types, but their role in non-small cell lung cancer (NSCLC) is unknown.
Liang Liu, Jimmy Ruiz, Stacey S. O’Neill, Stefan C. Grant, W. Jeffrey Petty, Meng Yang, Kexin Chen, Umit Topaloglu, Boris Pasche, Wei Zhang   +9 more
doaj   +1 more source

Molecular species delimitation refines the taxonomy of native and nonnative physinine snails in North America

Scientific Reports, 2021
Being able to associate an organism with a scientific name is fundamental to our understanding of its conservation status, ecology, and evolutionary history.
Michael K. Young, Rebecca Smith, Kristine L. Pilgrim, Michael K. Schwartz   +3 more
doaj   +1 more source

ForestPMPlot: A Flexible Tool for Visualizing Heterogeneity Between Studies in Meta-analysis. [PDF]

, 2016
Meta-analysis has become a popular tool for genetic association studies to combine different genetic studies. A key challenge in meta-analysis is heterogeneity, or the differences in effect sizes between studies.
Eskin, Eleazar, Han, Buhm, Kang, Eun Yong, Li, Xiao, Park, Yurang, Segrè, Ayellet V   +5 more
core   +3 more sources