Confronting Sources of Systematic Error to Resolve Historically Contentious Relationships: A Case Study Using Gadiform Fishes (Teleostei, Paracanthopterygii, Gadiformes) [PDF]
Systematic Biology, 2021 Abstract Reliable estimation of phylogeny is central to avoid inaccuracy in downstream macroevolutionary inferences. However, limitations exist in the implementation of concatenated and summary coalescent approaches, and Bayesian and full coalescent inference methods may not yet be feasible for computation of phylogeny using complicated ...
Adela Roa-Varon +2 more
exaly +6 more sources
The Complete Genome Sequences of 18 Species of Gadiformes (Actinopterygii, Chordata) [PDF]
Biodivers Genomes, 2022 We present the complete genome sequences of 18 species of Gadiformes from 9 genera. Illumina sequencing was performed on genetic material from single wild-caught individuals. The reads were assembled using a de novo method followed by a finishing step. The raw and assembled data is publicly available via Genbank.
Roa-Varon A, Pirro S.
exaly +4 more sources
The Influence of DNA Extraction Methods on Species Identification Results of Seafood Products [PDF]
Foods, 2022 In terms of species identification, the ultimate aim of extracting DNA is the subsequent amplification of the selected marker; therefore, the quality and quantity of the extracted DNA must be sufficient for PCR-based methods. The purpose of this study is
Rosalía Rodríguez-Riveiro +2 more
doaj +2 more sources
Ancestral reconstruction reveals catalytic inactivation of activation-induced cytidine deaminase concomitant with cold water adaption in the Gadiformes bony fish [PDF]
BMC Biology, 2022 Background Antibody affinity maturation in vertebrates requires the enzyme activation-induced cytidine deaminase (AID) which initiates secondary antibody diversification by mutating the immunoglobulin loci.
Atefeh Ghorbani +10 more
doaj +2 more sources
Rapid genome modifications including chromosomal fusions and large-scale inversions are key features in Arctic codfish species [PDF]
Genome BiologyBackground Genome evolvability involves activation of transposable elements (TEs) that result in novel genomic rearrangements, including translocations, deletions, duplications, as well as larger structural reorganizations, such as chromosomal inversions
Siv N. K. Hoff +7 more
doaj +2 more sources
The genome sequence of the Atlantic cod, Gadus morhua (Linnaeus, 1758) [version 2; peer review: 1 approved, 2 approved with reservations] [PDF]
Wellcome Open ResearchWe present a genome assembly from an individual male Gadus morhua (the Atlantic cod; Chordata; Actinopteri; Gadiformes; Gadidae). The genome sequence is 669.9 megabases in span. Most of the assembly is scaffolded into 23 chromosomal pseudomolecules. Gene
Sissel Jentoft +5 more
doaj +2 more sources
Genomic Survey and Microsatellite Marker Investigation of Patagonian Moray Cod (Muraenolepis orangiensis) [PDF]
Animals, 2022 The Muraenolepididae family of fishes, known as eel cods, inhabits continental slopes and shelves in the Southern Hemisphere. This family belongs to the Gadiformes order, which constitutes one of the most important commercial fish resources worldwide ...
Eunkyung Choi +6 more
doaj +2 more sources
A novel species of bothriocephalid cestode, Clestobothrium brettiae n. sp. in the European hake (Merluccius merluccius) revealed using an integrative taxonomic approach [PDF]
ParasitologyClestobothrium Lühe, 1899 is a genus of cestodes belonging to the order Bothriocephalidea, which infects marine fish from the Gadiformes order. Herein, a novel species of Clestobothrium is described from the intestine of the European hake Merluccius ...
Flavia Occhibove +2 more
doaj +2 more sources
An investigation of the prevalence and diversity of Anisakis in China: marine food safety implications [PDF]
Frontiers in MicrobiologyAnisakis can cause Anisakiasis in humans if raw or undercooked fish is consumed. Symptoms of infection may include vomiting, acute abdominal symptoms, or allergies.
Min-hao Zeng +6 more
doaj +2 more sources
Frontiers in Marine Science, 2023 The Patagonian moray cod, Muraenolepis orangiensis, belongs to the family Muraenolepididae and is the sole order of Gadiformes that inhabits the temperate and cold waters of the southern hemisphere.
Jinmu Kim +8 more
doaj +1 more source