Results 141 to 150 of about 37,179 (261)

Whole‐genome duplication promotes phenotypic and genetic adaptation to elevation

New Phytologist, EarlyView.
Fitness of diploids (2x) and tetraploids (4x) of Biscutella laevigata from low (circles) and high (triangles) elevation transplanted across elevation at 585, 1236 and 1967 m above sea level. Summary Whole‐genome duplication (WGD) is often considered as either an adaptive dead‐end or a facilitator of rapid adaptation under changing environments.
Sandra Grünig, Marc Beringer, Christian Parisod   +2 more
wiley   +1 more source

Avirulence genes of Magnaporthe oryzae are a pathogen defense arsenal shaped by cognate rice resistance genes in the field

New Phytologist, EarlyView.
Population structure and AVR gene presence/absence of 383 single‐spore isolates from the US Mo population. Summary We examined the frequency of and variation in eight avirulence (AVR) genes from 840 Magnaporthe oryzae field isolates collected from the Southern United States relative to rice resistance (R) genes deployed from 1959 to 2017. Little coding
Xueyan Wang, Grant T. Billings, Amanda M. Hulse‐Kemp, Quentin D. Read, Yulin Jia, Melissa H. Jia, Yixiao Huang, Yeshi Wamishe, Barbara Valent   +8 more
wiley   +1 more source

GATK Variant Discovery Pipeline

BIO-PROTOCOL
Cheng He, Sanzhen Liu
openaire   +1 more source

Excess endopolyploidy associated with cellular defects in neo‐autotetraploid Arabidopsis arenosa is in part corrected by a naturally evolved allele of CYCD3;2

New Phytologist, EarlyView.
Ploidy level distributions and endoreduplication profiles in diploid and tetraploid Arabidopsis arenosa. Summary Endopolyploidy (within‐organism polyploidy) is an often‐beneficial aspect of development. But polyploids, which have a higher baseline genome content, have been reported to have less endoreduplication than diploid relatives. Why has remained
Anis Meschichi, Marinela Dukić, Lars C. Schmid, Andreas L. Bachmann, Tadeas J. Priklopil, Hui San Tan, Kirsten Bomblies   +6 more
wiley   +1 more source

Integrating Mutation-Derived and Expression Features from Single-Cell RNA Sequencing: Pitfalls of Standard Cross-Validation in Small-Cohort Settings. [PDF]

Int J Mol Sci
Kunikeyev A, Salybekov AA, Yerimbetova A, Omarov B.   +3 more
europepmc   +1 more source

Integrated Metabolomics and Selection Signal Analysis Provide Insights Into the Selection for Flavonol Biosynthesis Associated With Lettuce Quality Improvement

Plant Biotechnology Journal, EarlyView.
ABSTRACT Lettuce is a critical leafy vegetable consumed worldwide and is a substantial dietary source of health‐promoting compounds. Exploring changes in metabolism during lettuce domestication under artificial selection conditions is important to facilitate further breeding and cultivation for quality improvement.
Xiao Yang, Shiwei Wei, Ge Jin, Li Zhang, Ran Du, Yajun Wang, Chengcheng Shen, Tao Huang, Guotao Huo, Jie Peng, Bo Song, Fangyuan Zhang, Victor Hugo Escalona Contreras, Lijun Luo, Yuejian Li, Francisco A. Tomas‐Barberan, Bin Liu, Qichang Yang   +17 more
wiley   +1 more source

T-rex: standardized analysis of germline variants in whole-exome sequencing trios. [PDF]

Sci Rep
Reh SL, Walter C, Lohse J, Ghete T, Metzler M, Hauer J, Auer F.   +6 more
europepmc   +1 more source

A Gain‐of‐Function Mutation in DELLA Selectively Alters Protein Interactions to Regulate Wheat Tiller Angle and Plant Height

Plant Biotechnology Journal, EarlyView.
ABSTRACT Plant architecture, especially plant height and tiller angle, plays a pivotal role in determining wheat yield. In this study, we characterize a wheat mutant termed prostrate and semidwarf 1 (prose1), exhibiting both a prostrate growth habit and semidwarfism.
Chaoqun Dong, Dejie Du, Yingying Li, Siyao Jia, Zhe Zhang, Yiqing Wang, Shuai Zheng, Xincheng Wang, Mingming Xin, Yingyin Yao, Lingling Chai, Zhongfu Ni, Qixin Sun, Jie Liu   +13 more
wiley   +1 more source

GATES: A Lightweight Tool Automating Pathogenic Variant Discovery From Raw Whole-Exome Sequencing Data. [PDF]

Cancer Inform
Bambach NE, Ricarte-Filho JC, Reichenberger ER, Franco AT.   +3 more
europepmc   +1 more source

A Lambda Red Recombinase‐Assisted CRISPR/Cas9 System for Efficient and Precise Genome Editing in Agrobacterium tumefaciens

Plant Biotechnology Journal, EarlyView.
ABSTRACT Agrobacterium tumefaciens is a powerful delivery tool for plant genetic transformation and a pivotal platform for agricultural biotechnology. However, laboratory strains of Agrobacterium have remained genetically unoptimized for decades, with genome engineering hindered by inefficient, endogenous homologous recombination systems.
Minmin Zheng, Rui Liu, Wei‐Chang Huang, Zuren Li, Kai Hua   +4 more
wiley   +1 more source