Results 231 to 240 of about 7,510,778 (382)

Additional file 3 of Annotation of genes involved in high level of dihydromyricetin production in vine tea (Ampelopsis grossedentata) by transcriptome analysis

, 2020
Xiaohua Li, Minhui Cao, Weibo Ma, Caihua Jia, Jinghuan Li, Mingxing Zhang, Changchun Liu, Zhenzhen Cao, Mohammad Omar Faruque, Xuebo Hu   +9 more
openalex   +1 more source

Transcriptional network analysis of PTEN‐protein‐deficient prostate tumors reveals robust stromal reprogramming and signs of senescent paracrine communication

Molecular Oncology, EarlyView.
Combining PTEN protein assessment and transcriptomic profiling of prostate tumors, we uncovered a network enriched in senescence and extracellular matrix (ECM) programs associated with PTEN loss and conserved in a mouse model. We show that PTEN‐deficient cells trigger paracrine remodeling of the surrounding stroma and this information could help ...
Ivana Rondon‐Lorefice, Jose I. Lopez, Aitziber Ugalde‐Olano, Maite Zufiaurre, Ianire Astobiza, Natalia Martin‐Martin, Laura Bozal‐Basterra, Saioa Garcia‐Longarte, Amaia Zabala‐Letona, Sofia Rey, Aida Santos‐Martin, Miguel Unda, Ana Loizaga‐Iriarte, Mariona Graupera, Paolo Nuciforo, Arkaitz Carracedo, Isabel Mendizabal   +16 more
wiley   +1 more source

Long-read transcriptomics of a diverse human cohort reveals ancestry bias in gene annotation. [PDF]

Nat Commun
Clavell-Revelles P, Reese F, Carbonell-Sala S, Degalez F, Arnan C, Oliveros W, Palumbo E, Perteghella T, Guigó R, Melé M.   +9 more
europepmc   +1 more source

De Novo Assembly, Gene Annotation and Marker Development Using Illumina Paired-End Transcriptome Sequences in Celery (Apium graveolens L.)

, 2013
Nan Fu, Qian Wang, Huolin Shen
openalex   +2 more sources

Integrative Functional Annotation of 52 Genetic Loci Influencing Myocardial Mass Identifies Candidate Regulatory Variants and Target Genes [PDF]

, 2019
Daiane Hemerich, Jiayi Pei, Magdaléna Harakaľová, Jessica van Setten, Sander Boymans, Bastiaan J. Boukens, Igor R. Efimov, Michelle Michels, Jolanda van der Velden, Aryan Vink, Caroline Cheng, Pim van der Harst, Jason H. Moore, Michal Mokrý, Vinicius Tragante, Folkert W. Asselbergs   +15 more
openalex   +1 more source

Functional annotation of enzyme-encoding genes using deep learning with transformer layers

, 2023
Gi Bae Kim, Ji Yeon Kim, Jong An Lee, Charles J. Norsigian, Bernhard Ø. Palsson, Sang Yup Lee   +5 more
openalex   +1 more source

BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs

Bioinform., 2015
Felipe A. Simão, Robert M. Waterhouse, P. Ioannidis, E. Kriventseva, E. Zdobnov   +4 more
semanticscholar   +1 more source

Potential therapeutic targeting of BKCa channels in glioblastoma treatment

Molecular Oncology, EarlyView.
This review summarizes current insights into the role of BKCa and mitoBKCa channels in glioblastoma biology, their potential classification as oncochannels, and the emerging pharmacological strategies targeting these channels, emphasizing the translational challenges in developing BKCa‐directed therapies for glioblastoma treatment.
Kamila Maliszewska‐Olejniczak, Karolina Pytlak, Sandra Jaworowska, Bogusz Kulawiak, Piotr Bednarczyk   +4 more
wiley   +1 more source

Likelihood-Based Gene Annotations for Gap Filling and Quality Assessment in Genome-Scale Metabolic Models

, 2014
Matthew N. Benedict, Michael Mundy, Christopher S. Henry, Nicholas Chia, Nathan D. Price   +4 more
openalex   +2 more sources

Reevaluating Human Gene Annotation: A Second-Generation Analysis of Chromosome 22 [PDF]

, 2002
John Collins, Melanie E. Goward, Charlotte G. Cole, Luc J Smink, Elizabeth J. Huckle, Sarah C. L. Knowles, Jacqueline M. Bye, David Beare, Ian Dunham   +8 more
openalex   +1 more source