Results 271 to 280 of about 7,510,778 (382)

Comment on 'Hayai-Annotation Plants: an ultrafast and comprehensive functional gene annotation system in plants': the importance of taking the GO graph structure into account. [PDF]

Bioinformatics, 2021
Van Bel M, Vandepoele K.
europepmc   +1 more source

Referee report. For: Correction of gene model annotations improves isoform abundance estimates: the example of ketohexokinase (Khk) [version 2; peer review: 1 approved, 2 approved with reservations]

, 2019
Patrick K. Kimes
openalex   +1 more source

Peroxidasin enables melanoma immune escape by inhibiting natural killer cell cytotoxicity

Molecular Oncology, EarlyView.
Peroxidasin (PXDN) is secreted by melanoma cells and binds the NK cell receptor NKG2D, thereby suppressing NK cell activation and cytotoxicity. PXDN depletion restores NKG2D signaling and enables effective NK cell–mediated melanoma killing. These findings identify PXDN as a previously unrecognized immune evasion factor and a potential target to improve
Hsu‐Min Sung, David Bickel, Lena C. M. Krause, Daria Ezeriņa, Christian Ickes, Julian Wojtachnia, Christine S. Gibhardt, Magdalena Shumanska, Khadija Wahni, Andrea Paluschkiwitz, Julia Malo Pueyo, Ekaterina Baranova, Wim Vranken, Hedwig Stanisz, Ioana Stejerean‐Todoran, Michael P. Schön, Joris Messens, Ivan Bogeski   +17 more
wiley   +1 more source

DeGeCI 1.1: a web platform for gene annotation of mitochondrial genomes. [PDF]

Bioinform Adv
Fiedler L, Bernt M, Middendorf M.
europepmc   +1 more source

Additional file 2: of De-novo transcriptome assembly for gene identification, analysis, annotation, and molecular marker discovery in Onobrychis viciifolia

, 2016
Marina Mora-Ortiz, Martin Swain, Martin Vickers, Matthew Hegarty, Rhys Kelly, Lydia Smith, Leif SkĂ ̧T   +6 more
openalex   +1 more source

Phenotypic and genotypic characterization of single circulating tumor cells in the follow‐up of high‐grade serous ovarian cancer

Molecular Oncology, EarlyView.
Single circulating tumor cells (sCTCs) from high‐grade serous ovarian cancer patients were enriched, imaged, and genomically profiled using WGA and NGS at different time points during treatment. sCTCs revealed enrichment of alterations in Chromosomes 2, 7, and 12 as well as persistent or emerging oncogenic CNAs, supporting sCTC identity.
Carolin Salmon, Rui P. L. Neves, Nikolas H. Stoecklein, Sven‐Thorsten Liffers, Jens Siveke, Jan D. Kuhlmann, Pauline Wimberger, Paul Buderath, Rainer Kimmig, Sabine Kasimir‐Bauer   +9 more
wiley   +1 more source

Tumor mutational burden as a determinant of metastatic dissemination patterns

Molecular Oncology, EarlyView.
This study performed a comprehensive analysis of genomic data to elucidate whether metastasis in certain organs share genetic characteristics regardless of cancer type. No robust mutational patterns were identified across different metastatic locations and cancer types.
Eduardo Candeal, Andrea Moreno‐Manuel, Miguel Salvadó‐Pertierra, Cristina Santos‐Vivas, Rebeca Sanz‐Pamplona   +4 more
wiley   +1 more source

PIPETS: a statistically informed, gene-annotation agnostic analysis method to study bacterial termination using 3'-end sequencing. [PDF]

BMC Bioinformatics
Furumo Q, Meyer MM.
europepmc   +1 more source

Adaptive Immune Receptor Repertoire (AIRR) Community Guide to TR and IG Gene Annotation.

Methods Mol Biol, 2022
Babrak L, Marquez S, Busse CE, Lees WD, Miho E, Ohlin M, Rosenfeld AM, Stervbo U, Watson CT, Schramm CA, AIRR Community.   +10 more
europepmc   +1 more source

Revised Transcriptome-Based Gene Annotation for Aspergillus flavus Strain NRRL 3357. [PDF]

Microbiol Resour Announc, 2020
Hatmaker EA, Zhou X, Mead ME, Moon H, Yu JH, Rokas A.   +5 more
europepmc   +1 more source