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Gene Annotation and Database of the Radish
2017The genome sequences of Raphanus sativus var. hortensis were determined for the Japanese cultivars ‘Aokubi S-h’ (Kitashiba et al. in DNA Res 21:481–490, 2014), ‘Aokubi doubled haploid (DH)’ (Mitsui et al. in Sci Rep 5:10835, 2015), and the Korean cultivar ‘WK10039’ (Jeong et al. in Theor Appl Genet 129:1357–1372, 2016).
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COGNATE: Comparative Gene Annotation Characterizer
2019Comprehensive structural characterization of protein-coding gene repertoires is a crucial step to identify differences and commonalities in comparative genomics contexts. This requires a descriptive set of standardized parameters as well as summary statistics of, e.g., gene lengths and exon counts. We developed the tool COGNATE to gather this data from
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