Results 71 to 80 of about 7,142,455 (272)

Gene Ontology Consortium: going forward. [PDF]

open access: yes, 2015
The Gene Ontology (GO; http://www.geneontology.org) is a community-based bioinformatics resource that supplies information about gene product function using ontologies to represent biological knowledge.
Gene Ontology Consortium
core   +1 more source

Multi-label literature classification based on the Gene Ontology graph

open access: yesBMC Bioinformatics, 2008
Background The Gene Ontology is a controlled vocabulary for representing knowledge related to genes and proteins in a computable form. The current effort of manually annotating proteins with the Gene Ontology is outpaced by the rate of accumulation of ...
Lu Xinghua   +3 more
doaj   +1 more source

The Gene Ontology Annotation (GOA) Database: sharing knowledge in Uniprot with Gene Ontology [PDF]

open access: yesNucleic Acids Research, 2004
The Gene Ontology Annotation (GOA) database (http://www.ebi.ac.uk/GOA) aims to provide high-quality electronic and manual annotations to the UniProt Knowledgebase (Swiss-Prot, TrEMBL and PIR-PSD) using the standardized vocabulary of the Gene Ontology (GO).
Michele Magrane   +9 more
openaire   +3 more sources

MEGO: gene functional module expression based on gene ontology

open access: yesBioTechniques, 2005
Existing analysis tools to study the collective properties of gene functional modules cannot return highly homogeneous modules and do not provide quantitative measures of module activity level.
Kang Tu, Hui Yu, Mingzhu Zhu
doaj   +1 more source

Clustering of gene ontology terms in genomes [PDF]

open access: yesGene, 2014
Although protein coding genes occupy only a small fraction of genomes in higher species, they are not randomly distributed within or between chromosomes. Clustering of genes with related function(s) and/or characteristics has been evident at several different levels.
Mauno Vihinen   +4 more
openaire   +5 more sources

The Zebrafish Information Network: new support for non-coding genes, richer Gene Ontology annotations and the Alliance of Genome Resources

open access: yesNucleic Acids Res., 2018
The Zebrafish Information Network (ZFIN) (https://zfin.org/) is the database for the model organism, zebrafish (Danio rerio). ZFIN expertly curates, organizes and provides a wide array of zebrafish genetic and genomic data, including genes, alleles ...
Leyla Ruzicka   +18 more
semanticscholar   +1 more source

GOGO: An improved algorithm to measure the semantic similarity between gene ontology terms

open access: yesScientific Reports, 2018
Measuring the semantic similarity between Gene Ontology (GO) terms is an essential step in functional bioinformatics research. We implemented a software named GOGO for calculating the semantic similarity between GO terms.
Chenguang Zhao, Z. Wang
semanticscholar   +1 more source

The Vision and Challenges of the Gene Ontology [PDF]

open access: yes, 2016
The overarching goal of the Gene Ontology (GO) Consortium is to provide researchers in biology and biomedicine with all current functional information concerning genes and the cellular context under which these occur. When the GO was started in the 1990s surprisingly little attention had been given to how functional information about genes was to be ...
openaire   +5 more sources

Prediction and analysis of essential genes using the enrichments of gene ontology and KEGG pathways

open access: yesPLoS ONE, 2017
Identifying essential genes in a given organism is important for research on their fundamental roles in organism survival. Furthermore, if possible, uncovering the links between core functions or pathways with these essential genes will further help us ...
Lei Chen   +5 more
semanticscholar   +1 more source

Ontology-based knowledge representation of experiment metadata in biological data mining [PDF]

open access: yes, 2009
According to the PubMed resource from the U.S. National Library of Medicine, over 750,000 scientific articles have been published in the ~5000 biomedical journals worldwide in the year 2007 alone.
Burke, Squires   +12 more
core   +1 more source

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