Results 11 to 20 of about 563,010 (309)
Frontiers in Genetics, 2023 Dollar spot is one of the most damaging diseases in turfgrass, reducing its quality and playability. Two species, Clarireedia monteithiana and C. jacksonii (formerly Sclerotinia homoeocarpa) have been reported so far in the United States To study the ...
Bochra Amina Bahri +9 more
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StartLink and StartLink+: Prediction of Gene Starts in Prokaryotic Genomes
Frontiers in Bioinformatics, 2021 State-of-the-art algorithms of ab initio gene prediction for prokaryotic genomes were shown to be sufficiently accurate. A pair of algorithms would agree on predictions of gene 3′ends. Nonetheless, predictions of gene starts would not match for 15–25% of
Karl Gemayel +4 more
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SNAPper: gene order predicts gene function [PDF]
Bioinformatics, 2002 Abstract Summary: SNAPper is a network service for predicting gene function based on the conservation of gene order. Availability: The SNAPper server is available at http://pedant.gsf.de/snapper. SNAPper-based functional predictions will soon be offered as part of the PEDANT genome analysis server http://pedant.gsf.de.
Grigory, Kolesov +2 more
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Frontiers in Medicine, 2022 BackgroundThe long-term health consequences of coronavirus disease 2019 (COVID-19) remain largely unclear. This study aimed to apply the Mendelian randomization (MR) design to estimate the causal associations between COVID-19 and ten cardiovascular ...
Min Jia +3 more
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Computational prediction of miRNA genes from small RNA sequencing data
Frontiers in Bioengineering and Biotechnology, 2015 Next-generation sequencing now for the first time allows researchers to gauge the depth and variation of entire transcriptomes. However, now as rare transcripts can be detected that are present in cells at single copies, more advanced computational tools
Wenjing eKang, Marc Riemer Friedländer
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PrismEXP: gene annotation prediction from stratified gene-gene co-expression matrices [PDF]
PeerJ, 2023 Background Gene-gene co-expression correlations measured by mRNA-sequencing (RNA-seq) can be used to predict gene annotations based on the co-variance structure within these data.
Alexander Lachmann +5 more
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Frontiers in Genetics, 2017 Satsuma (Citrus unshiu Marc.) is one of the most abundantly produced mandarin varieties of citrus, known for its seedless fruit production and as a breeding parent of citrus. De novo assembly of the heterozygous diploid genome of Satsuma (“Miyagawa Wase”)
Tokurou Shimizu +8 more
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A Gene-disease Association Prediction Algorithm Based on Multi-source Data Fusion [PDF]
International Journal Bioautomation, 2022 Accurate gene-disease association prediction results are the basis for effective diagnosis and treatment of complex genetic diseases. However, existing studies related to this topic generally face problems in two aspects: large volume of original data ...
Fei Wang
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Frontiers in Plant Science, 2019 Sharka, a common disease among most stone fruit crops, is caused by the Plum Pox Virus (PPV). Resistant genotypes have been found in apricot (Prunus armeniaca L.), one of which—the cultivar ‘Lito’ heterozygous for the resistance—has been used to map a ...
Gloria De Mori +11 more
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Comprehensive evaluation of protein-coding sORFs prediction based on a random sequence strategy
Frontiers in Bioscience-Landmark, 2021 Background: Small open reading frames (sORFs) with protein-coding ability present unprecedented challenge for genome annotation because of their short sequence and low expression level.
Jiafeng Yu +8 more
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