Results 31 to 40 of about 9,911,867 (381)
PrismEXP: gene annotation prediction from stratified gene-gene co-expression matrices [PDF]
PeerJ, 2023 Background Gene-gene co-expression correlations measured by mRNA-sequencing (RNA-seq) can be used to predict gene annotations based on the co-variance structure within these data.
Alexander Lachmann +5 more
doaj +2 more sources
BUSCO Applications from Quality Assessments to Gene Prediction and Phylogenomics
bioRxiv, 2017 Genomics promises comprehensive surveying of genomes and metagenomes, but rapidly changing technologies and expanding data volumes make evaluation of completeness a challenging task. Technical sequencing quality metrics can be complemented by quantifying
Robert M. Waterhouse +7 more
semanticscholar +1 more source
Predicting Synthetic Gene Networks [PDF]
, 2011 Synthetic biology aims at designing and building new biological functions in living organisms. The complexity of cellular regulation (regulatory, metabolic, and signaling interactions, and their coordinated action) can be tackled via the development of quantitative mathematical models.
di Bernardo, Diego +3 more
openaire +3 more sources
Computational prediction of miRNA genes from small RNA sequencing data
Frontiers in Bioengineering and Biotechnology, 2015 Next-generation sequencing now for the first time allows researchers to gauge the depth and variation of entire transcriptomes. However, now as rare transcripts can be detected that are present in cells at single copies, more advanced computational tools
Wenjing eKang, Marc Riemer Friedländer
doaj +1 more source
Frontiers in Genetics, 2017 Satsuma (Citrus unshiu Marc.) is one of the most abundantly produced mandarin varieties of citrus, known for its seedless fruit production and as a breeding parent of citrus. De novo assembly of the heterozygous diploid genome of Satsuma (“Miyagawa Wase”)
Tokurou Shimizu +8 more
doaj +1 more source
BMC Bioinformatics, 2020 Recent advances in sequencing technologies have led to an explosion in the number of genomes available, but accurate genome annotation remains a major challenge.
C. Meyer +5 more
semanticscholar +1 more source
From obesity resistance to obesity prediction and prevention? [PDF]
, 2016 Comment on: Regulation of hypothalamic neuropeptides gene expression in diet induced obesity resistant rats: possible targets for obesity prediction?
Cassano, Tommaso, Gaetani, Silvana
core +4 more sources
Frontiers in Plant Science, 2019 Sharka, a common disease among most stone fruit crops, is caused by the Plum Pox Virus (PPV). Resistant genotypes have been found in apricot (Prunus armeniaca L.), one of which—the cultivar ‘Lito’ heterozygous for the resistance—has been used to map a ...
Gloria De Mori +11 more
doaj +1 more source
Automatic Gene Function Prediction in the 2020’s [PDF]
Genes, 2020 The current rate at which new DNA and protein sequences are being generated is too fast to experimentally discover the functions of those sequences, emphasizing the need for accurate Automatic Function Prediction (AFP) methods. AFP has been an active and growing research field for decades and has made considerable progress in that time.
Roeland C. H. J. van Ham +3 more
openaire +4 more sources
Prediction of HLA class II alleles using SNPs in an African population [PDF]
, 2012 BACKGROUND: Despite the importance of the human leukocyte antigen (HLA) gene locus in research and clinical practice, direct HLA typing is laborious and expensive.
Adeyemo, Adebowale +7 more
core +4 more sources