Results 11 to 20 of about 772,345 (307)

fIDBAC: A Platform for Fast Bacterial Genome Identification and Typing

open access: yesFrontiers in Microbiology, 2021
To study the contamination of microorganisms in the food industry, pharmaceutical industry, clinical diagnosis, or bacterial taxonomy, accurate identification of species is a key starting point of further investigation.
Qian Liang   +13 more
doaj   +1 more source

Bacterial genome mapper: A comparative bacterial genome mapping tool [PDF]

open access: yesBioinformation, 2012
Recently, next generation sequencing (NGS) technologies have led to a revolutionary increase in sequencing speed and costefficacy. Consequently, a vast number of contigs from many recently sequenced bacterial genomes remain to be accurately mapped and annotated, requiring the development of more convenient bioinformatics programs.
Lee, Kang Seon   +12 more
openaire   +2 more sources

Genome-guided insight into the methylotrophy of Paracoccus aminophilus JCM 7686

open access: yesFrontiers in Microbiology, 2015
Paracoccus aminophilus JCM 7686 (Alphaproteobacteria) is a facultative, heterotrophic methylotroph capable of utilizing a wide range of C1 compounds as sole carbon and energy sources.
Lukasz eDziewit   +6 more
doaj   +1 more source

Strains used in whole organism Plasmodium falciparum vaccine trials differ in genome structure, sequence, and immunogenic potential

open access: yesGenome Medicine, 2020
Background Plasmodium falciparum (Pf) whole-organism sporozoite vaccines have been shown to provide significant protection against controlled human malaria infection (CHMI) in clinical trials.
Kara A. Moser   +33 more
doaj   +1 more source

Whole-Genome Sequencing and Concordance Between Antimicrobial Susceptibility Genotypes and Phenotypes of Bacterial Isolates Associated with Bovine Respiratory Disease. [PDF]

open access: yes, 2017
Extended laboratory culture and antimicrobial susceptibility testing timelines hinder rapid species identification and susceptibility profiling of bacterial pathogens associated with bovine respiratory disease, the most prevalent cause of cattle ...
Abdo, Zaid   +13 more
core   +2 more sources

100K Pathogen Genome Project. [PDF]

open access: yes, 2017
The 100K Pathogen Genome Project is producing draft and closed genome sequences from diverse pathogens. This project expanded globally to include a snapshot of global bacterial genome diversity.
Weimer, Bart C
core   +1 more source

Bacterial Genomics and Epidemiology

open access: yesMicroorganisms, 2023
Innovative technologies for Whole-Genome Sequencing (WGS) help to improve our understanding of the epidemiology and pathogenesis of bacterial infectious diseases and are becoming affordable for most microbiological laboratories [...]
Javier Garaizar, Lorena Laorden
openaire   +4 more sources

Diversity and role of plasmids in adaptation of bacteria inhabiting the Lubin copper mine in Poland, an environment rich in heavy metals

open access: yesFrontiers in Microbiology, 2015
The Lubin underground mine, is one of three mining divisions in the Lubin-Glogow Copper District in Lower Silesia province (Poland). It is the source of polymetallic ore that is rich in copper, silver and several heavy metals.
Lukasz eDziewit   +8 more
doaj   +1 more source

Genome-wide insights into population structure and host specificity of Campylobacter jejuni

open access: yesScientific Reports, 2021
The zoonotic pathogen Campylobacter jejuni is among the leading causes of foodborne diseases worldwide. While C. jejuni colonises many wild animals and livestock, persistence mechanisms enabling the bacterium to adapt to host species' guts are not fully ...
Lennard Epping   +11 more
doaj   +1 more source

CRISPR/FnCas12a-mediated efficient multiplex and iterative genome editing in bacterial plant pathogens without donor DNA templates.

open access: yesPLoS Pathogens, 2023
CRISPR-based genome editing technology is revolutionizing prokaryotic research, but it has been rarely studied in bacterial plant pathogens. Here, we have developed a targeted genome editing method with no requirement of donor templates for convenient ...
Fang Yan   +11 more
doaj   +1 more source

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