Results 11 to 20 of about 2,069,635 (294)
PROBEAT: PRObiotic Bacterial gEnome Analysis Toolkit [PDF]
Current Issues in Molecular BiologyWhole-genome sequencing has become a central approach for investigating candidate probiotic bacterial isolates, but probiogenomic analysis often requires multiple independent tools, manual marker-gene searches and study-specific interpretation of ...
Vesselin Baev
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Systematic determination of the mosaic structure of bacterial genomes: species backbone versus strain-specific loops [PDF]
BMC Bioinformatics, 2005 Background Public databases now contain multitude of complete bacterial genomes, including several genomes of the same species. The available data offers new opportunities to address questions about bacterial genome evolution, a task that requires ...
Gendrault-Jacquemard A +6 more
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The Evolution of Bacterial Genome Architecture [PDF]
Frontiers in Genetics, 2017 The genome architecture of bacteria and eukaryotes evolves in opposite directions when subject to genetic drift, a difference that can be ascribed to the fact that bacteria exhibit a mutational bias that deletes superfluous sequences, whereas eukaryotes ...
Louis-Marie Bobay, Howard Ochman
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Genome signatures, self-organizing maps and higher order phylogenies: a parametric analysis [PDF]
, 2007 Genome signatures are data vectors derived from the compositional statistics of DNA. The self-organizing map (SOM) is a neural network method for the conceptualisation of relationships within complex data, such as genome signatures.
Gatherer, Derek, Derek Gatherer
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FEMS Microbiology Reviews, 1994 During the last decade, great advances have been made in the study of bacterial genomes which is perhaps better described by the term bacterial genomics. The application of powerful techniques, such as pulsed-field gel electrophoresis of macro-restriction fragments of genomic DNA, has freed the characterisation of the chromosomes of many bacteria from ...
S T, Cole, I, Saint Girons
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mSystems, 2021 Bacillus subtilis produces a wide range of secondary metabolites providing diverse plant growth-promoting and biocontrol abilities. These secondary metabolites include nonribosomal peptides with strong antimicrobial properties, causing either cell lysis,
Heiko T. Kiesewalter +10 more
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Bacterial Genome Instability [PDF]
Microbiology and Molecular Biology Reviews, 2014 SUMMARY Bacterial genomes are remarkably stable from one generation to the next but are plastic on an evolutionary time scale, substantially shaped by horizontal gene transfer, genome rearrangement, and the activities of mobile DNA elements. This implies the existence of a delicate balance between the maintenance of genome stability and the ...
Elise, Darmon, David R F, Leach
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BMC Genomics, 2023 Background Bacterial epidemiology needs to understand the spread and dissemination of strains in a One Health context. This is important for highly pathogenic bacteria such as Bacillus anthracis, Brucella species, and Francisella tularensis. Whole genome
Jörg Linde +6 more
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The layout of a bacterial genome [PDF]
FEBS Letters, 2012 Recently the mismatch between our newly acquired capacity to synthetize DNA at genome scale, and our low capacity to design ab initio a functional genome has become conspicuous. This essay gathers a variety of constraints that globally shape natural genomes, with a focus on eubacteria.
Képès, François +5 more
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Bacterial Genomics and Epidemiology
Microorganisms, 2023 Innovative technologies for Whole-Genome Sequencing (WGS) help to improve our understanding of the epidemiology and pathogenesis of bacterial infectious diseases and are becoming affordable for most microbiological laboratories [...]
Javier Garaizar, Lorena Laorden
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