Results 61 to 70 of about 127,688 (161)

Draft genome sequence of Aspergillus flavus isolate TERIBR1, a highly tolerant fungus to chromium stress

BMC Research Notes, 2019
Objectives Aspergillus flavus isolate TERIBR1 was isolated from tannery sludge highly contaminated with chromium. During characterization process, it exhibited capability to adapt and grow in fungal growth media amended with chromium concentration as ...
Pushplata Prasad Singh, Akanksha Jaiswar, Divya Srivastava, Alok Adholeya   +3 more
doaj   +1 more source

Population genomics of Vitis pseudoreticulata reveals the genetic basis of fungal resistance in grapevine

Horticultural Plant Journal
Grapevine cultivation is facing significant challenges from fungal diseases. Wild Vitis species exhibit extraordinary fungal resistance, offering valuable genetic resources for grapevine improvement, yet their genetic basis of fungal resistance remains ...
Zhen Zhang, Wenwen Liu, Tianhao Zhang, Zhuyifu Chen, Mengyan Zhang, Jin Yao, Yuting Liu, Jiacui Li, Tianrong Fan, Ruoyan Zhao, Siqi Qiao, Yingchun Zhang, Lianzhu Zhou, Yang Dong, Yanshuai Xu, Ruirui Liu, Ling Tian, Yongfeng Zhou, Xiaodong Xu   +18 more
doaj   +1 more source

Annotation of Fungal Genomes

, 2010
We describe the annotation process for fungal genome sequencing projects, with special emphasis on protein-coding genes. The characteristics of gene structures in various fungal phyla and strength and weaknesses of the available gene prediction programs are discussed.
Diego Martinez, Igor Grigoriev, Asaf A. Salamov   +2 more
openaire   +2 more sources

Disentangling the importance of microbiological and physico-chemical properties of Ethiopian field soils for the Striga seed bank and sorghum infestation

Environmental Microbiome
Background Striga hermonthica (Striga) is a parasitic weed that severely affects sorghum yield in sub-Saharan Africa. Recent studies highlighted the soil microbiome’s potential to suppress Striga through interference with specific stages in its life ...
Tamera Taylor, Getahun Benti, Marcio F.A. Leite, Luisa M. Arias-Giraldo, Desalegn W. Etalo, Sewunet Abera, Lorenzo Lombard, Jose G. Maciá-Vicente, Stefan Sanow, Dominika Rybka, Thomas Mostert, Einar Martinez de la Parte, Daniel Legesse, Urgesa Tsega Tulu, Jiregna Daksa, Roy van Doorn, Raycenne Rosa Leite, Taye Tessema, Pedro W. Crous, Dorota Kawa, Eiko E. Kuramae, Jos M. Raaijmakers, Siobhan M. Brady   +22 more
doaj   +1 more source

The Xenopyricularia zizaniicola exhibits a genome architecture distinct to the two-speed genome

Microbiology Spectrum
The fungal pathogens exhibit diverse genome architecture, which facilitates the host adaptation. Although increasing high-quality genomic data enable insights into the genome architecture of many fungal pathogens during the last decades, genomic features
Zhenyu Fang, Yuyong Li, Jianqiang Huang, Jianhong Wang, Xiwen Lian, Shuhui Lin, Zonghua Wang, Yongsheng Zhu, Huakun Zheng   +8 more
doaj   +1 more source

Discovering the hidden function in fungal genomes

Nature Communications
New molecular technologies have helped unveil previously unexplored facets of the genome beyond the canonical proteome, including microproteins and short ORFs, products of alternative splicing, regulatory non-coding RNAs, as well as transposable elements,
Nicholas C. Gervais, Rebecca S. Shapiro
doaj   +1 more source

Discovery of fungal onoceroid triterpenoids through domainless enzyme-targeted global genome mining

Nature Communications
Genomics-guided methodologies have revolutionized the discovery of natural products. However, a major challenge in the field of genome mining is determining how to selectively extract biosynthetic gene clusters (BGCs) for untapped natural products from ...
Jia Tang, Yudai Matsuda
doaj   +1 more source

Signatures of Mollicutes-related endobacteria in publicly available Mucoromycota genomes

mSphere
Mucoromycota fungi and their Mollicutes-related endobacteria (MRE) are an ideal system for studying bacterial–fungal interactions and evolution due to the long-term and intimate nature of their interactions.
Reid Longley, Aaron J. Robinson, Olivia A. Asher, Earl Middlebrook, Gregory Bonito, Patrick S. G. Chain   +5 more
doaj   +1 more source

An integrated genomic and transcriptomic survey of mucormycosis-causing fungi

Nature Communications, 2016
Fungi of the order Mucorales can cause life-threatening infections. Here, Chibucos et al. present genomic and transcriptomic analyses of a diverse set of Mucorales fungi, shedding light on their evolution and identifying potential therapeutic targets in ...
Marcus C. Chibucos, Sameh Soliman, Teclegiorgis Gebremariam, Hongkyu Lee, Sean Daugherty, Joshua Orvis, Amol C. Shetty, Jonathan Crabtree, Tracy H. Hazen, Kizee A. Etienne, Priti Kumari, Timothy D. O’Connor, David A. Rasko, Scott G. Filler, Claire M. Fraser, Shawn R. Lockhart, Christopher D. Skory, Ashraf S. Ibrahim, Vincent M. Bruno   +18 more
doaj   +1 more source

Fungal Genomes and Beyond

Fungal Genomics & Biology, 2012
The sequencing of fungal genomes is advancing at breakneck-speed, producing voluminous amounts of data. Within the next five years, it is possible that over a couple thousand genomes, representing every major fungal family will be completed and available to the scientific community.
openaire   +1 more source