Results 21 to 30 of about 4,524,973 (357)
Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads
bioRxiv, 2016 The Illumina DNA sequencing platform generates accurate but short reads, which can be used to produce accurate but fragmented genome assemblies. Pacific Biosciences and Oxford Nanopore Technologies DNA sequencing platforms generate long reads that can ...
R. Wick, L. Judd, C. Gorrie, K. Holt
semanticscholar +1 more source
CloVR-Comparative: automated, cloud-enabled comparative microbial genome sequence analysis pipeline
BMC Genomics, 2017 Background The benefit of increasing genomic sequence data to the scientific community depends on easy-to-use, scalable bioinformatics support. CloVR-Comparative combines commonly used bioinformatics tools into an intuitive, automated, and cloud-enabled ...
Sonia Agrawal +12 more
doaj +1 more source
In situ structures of the genome and genome-delivery apparatus in a single-stranded RNA virus. [PDF]
, 2016 Packaging of the genome into a protein capsid and its subsequent delivery into a host cell are two fundamental processes in the life cycle of a virus. Unlike double-stranded DNA viruses, which pump their genome into a preformed capsid, single-stranded ...
Dai, Xinghong +6 more
core +1 more source
NCBI prokaryotic genome annotation pipeline
Nucleic Acids Research, 2016 Recent technological advances have opened unprecedented opportunities for large-scale sequencing and analysis of populations of pathogenic species in disease outbreaks, as well as for large-scale diversity studies aimed at expanding our knowledge across ...
T. Tatusova +9 more
semanticscholar +1 more source
Asymmetric somatic plant hybridization : status and applications [PDF]
, 2013 To create asymmetric somatic hybrids, the genome of the so-called donor protoplast is fragmented prior to protoplast fusion. As a result, only a limited amount of the donor genome is transferred to the fusion product.
Deryckere, Dieter +4 more
core +2 more sources
RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome
BMC Bioinformatics, 2011 BackgroundRNA-Seq is revolutionizing the way transcript abundances are measured. A key challenge in transcript quantification from RNA-Seq data is the handling of reads that map to multiple genes or isoforms.
Bo Li, Colin N. Dewey
semanticscholar +1 more source
Emerging Microbes and Infections, 2020 A mysterious outbreak of atypical pneumonia in late 2019 was traced to a seafood wholesale market in Wuhan of China. Within a few weeks, a novel coronavirus tentatively named as 2019 novel coronavirus (2019-nCoV) was announced by the World Health ...
Jasper Fuk-Woo Chan +6 more
doaj +1 more source
Draft Genome Sequence of Frankia sp. Strain CN3, an Atypical, Noninfective (Nod–) Ineffective (Fix–) Isolate from Coriaria nepalensis [PDF]
, 2013 We report here the genome sequence of Frankia sp. strain CN3, which was isolated from Coriaria nepalensis. This genome sequence is the first from the fourth lineage of Frankia, strains of which are unable to reinfect actinorhizal plants.
Beauchemin, Nicholas +33 more
core +2 more sources
Roary: rapid large-scale prokaryote pan genome analysis
bioRxiv, 2015 Summary A typical prokaryote population sequencing study can now consist of hundreds or thousands of isolates. Interrogating these datasets can provide detailed insights into the genetic structure of of prokaryotic genomes.
Andrew J. Page +9 more
semanticscholar +1 more source
Nutrigenomics: The science of the 21st century [PDF]
Vojnosanitetski Pregled, 2011 nema
Stojanović Dušica, Marković Danica
doaj +1 more source