Results 41 to 50 of about 4,524,973 (357)

BATCH-GE : batch analysis of next-generation sequencing data for genome editing assessment [PDF]

, 2016
Targeted mutagenesis by the CRISPR/Cas9 system is currently revolutionizing genetics. The ease of this technique has enabled genome engineering in-vitro and in a range of model organisms and has pushed experimental dimensions to unprecedented proportions.
Boel, Annekatrien, Callewaert, Bert, Coucke, Paul, De Paepe, Anne, De Rocker, Nina, Menten, Björn, Steyaert, Wouter, Willaert, Andy   +7 more
core   +2 more sources

GenColors: Annotation and comparative genomics made easy [PDF]

, 2009
GenColors is a web-based software/database system initially aimed at an improved and accelerated annotation of prokaryotic genomes making extensive use of genome comparison (Romualdi et al., _Bioinformatics_ 2005; Romualdi et al., _Methods Mol.
Alessandro Romualdi, Gernot Gloeckner, Juergen Suehnel, Marius Felder, Matthias Platzer   +4 more
core   +2 more sources

Pilon: An Integrated Tool for Comprehensive Microbial Variant Detection and Genome Assembly Improvement

PLoS ONE, 2014
Advances in modern sequencing technologies allow us to generate sufficient data to analyze hundreds of bacterial genomes from a single machine in a single day.
B. J. Walker, T. Abeel, Terrance Shea, M. Priest, Amr Abouelliel, Sharadha Sakthikumar, Christina A. Cuomo, Q. Zeng, J. Wortman, Sarah K. Young, A. Earl   +10 more
semanticscholar   +1 more source

Genes involved in translation of Mycoplasma hyopneumoniae and Mycoplasma synoviae

Genetics and Molecular Biology, 2007
This is a report on the analysis of genes involved in translation of the complete genomes of Mycoplasma hyopneumoniae strain J and 7448 and Mycoplasma synoviae.
Mônica de Oliveira Santos, Nadya da Silva Castro, Maristela Pereira, Célia Maria de Almeida Soares   +3 more
doaj   +1 more source

Evolution of genome size in asexual populations

, 2015
Genome sizes have evolved to vary widely, from 250 bases in viroids to 670 billion bases in amoeba. This remarkable variation in genome size is the outcome of complex interactions between various evolutionary factors such as point mutation rate ...
Adami, Christoph, Gupta, Aditi, LaBar, Thomas, Miyagi, Michael   +3 more
core   +1 more source

Plant genetic reseources: effective utilization [PDF]

, 2010
Characterizing better understanding the genome organization and differentiating identity of genotypes based on their morphology and genome characteristics are vital determinants in their commercialization, management of germplasm repositories, and ...
Budak, Hikmet
core   +1 more source

Phylogenetic and Genome Analysis of 17 Novel Senecavirus A Isolates in Guangdong Province, 2017

Frontiers in Veterinary Science, 2018
Senecavirus A (SVA), an emerging RNA virus, is considered to be associated with porcine idiopathic vesicular disease (PIVD). From February to September 2017, 17 novel SVA strains were isolated from samples with the vesicular disease from Guangdong ...
Yuan Sun, Yuan Sun, Jian Cheng, Jian Cheng, Rui-Ting Wu, Rui-Ting Wu, Zi-Xian Wu, Jun-Wei Chen, Ying Luo, Ying Luo, Qing-Mei Xie, Qing-Mei Xie, Jing-Yun Ma, Jing-Yun Ma   +13 more
doaj   +1 more source

The Chlamydomonas genome project: A decade on [PDF]

, 2014
The green alga Chlamydomonas reinhardtii is a popular unicellular organism for studying photosynthesis, cilia biogenesis, and micronutrient homeostasis.
Aksoy, M, Blaby, IK, Blaby-Haas, CE, Dutcher, S, Goodstein, D, Grimwood, J, Grossman, A, Harris, EH, Hom, EFY, King, S, Lopez, D, Merchant, SS, Porter, M, Prochnik, S, Schmutz, J, Stanke, M, Tourasse, N, Umen, J, Vallon, O, Witman, GB   +19 more
core   +1 more source

MitoHiFi: a python pipeline for mitochondrial genome assembly from PacBio high fidelity reads

bioRxiv, 2023
Background  PacBio high fidelity (HiFi) sequencing reads are both long (15–20 kb) and highly accurate (> Q20). Because of these properties, they have revolutionised genome assembly leading to more accurate and contiguous genomes.
Marcela Uliano-Silva, João Gabriel R. N. Ferreira, Ksenia Krasheninnikova, G. Formenti, Linelle Abueg, J. Torrance, Eugene W. Myers, R. Durbin, Mark Blaxter, Shane A. McCarthy   +9 more
semanticscholar   +1 more source

100K Pathogen Genome Project. [PDF]

, 2017
The 100K Pathogen Genome Project is producing draft and closed genome sequences from diverse pathogens. This project expanded globally to include a snapshot of global bacterial genome diversity.
Weimer, Bart C
core   +1 more source