Results 41 to 50 of about 1,502,773 (308)
mSystems, 2019 Extensive drug resistance (XDR) is an escalating global problem. Escherichia coli strain Sanji was isolated from an outbreak of pheasant colibacillosis in Fujian province, China, in 2011.
Xiancheng Zeng +9 more
doaj +3 more sources
Degradative Capacity of Two Strains of Rhodonia placenta: From Phenotype to Genotype
Frontiers in Microbiology, 2020 Brown rot fungi, such as Rhodonia placenta (previously Postia placenta), occur naturally in northern coniferous forest ecosystems and are known to be the most destructive group of decay fungi, degrading wood faster and more effectively than other wood ...
Martina Kölle +7 more
doaj +1 more source
The genome and transcriptome of Trichormus sp NMC-1: insights into adaptation to extreme environments on the Qinghai-Tibet Plateau [PDF]
, 2016 The Qinghai-Tibet Plateau (QTP) has the highest biodiversity for an extreme environment worldwide, and provides an ideal natural laboratory to study adaptive evolution.
A Stamatakis +53 more
core +2 more sources
Ultrafast Comparison of Personal Genomes via Precomputed Genome Fingerprints
Frontiers in Genetics, 2017 We present an ultrafast method for comparing personal genomes. We transform the standard genome representation (lists of variants relative to a reference) into “genome fingerprints” via locality sensitive hashing. The resulting genome fingerprints can be
Gustavo Glusman +3 more
doaj +1 more source
Large scale single nucleotide polymorphism discovery in unsequenced genomes using second generation high throughput sequencing technology: applied to turkey [PDF]
, 2009 Background - The development of second generation sequencing methods has enabled large scale DNA variation studies at moderate cost. For the high throughput discovery of single nucleotide polymorphisms (SNPs) in species lacking a sequenced reference ...
Kerstens, H.H.D. +6 more
core +2 more sources
Whole Genome Comparison on a Network of Workstations [PDF]
Sixth International Symposium on Parallel and Distributed Computing (ISPDC'07), 2007 Whole genome comparison consists of comparing or aligning genome sequences with a goal of finding similarities between them. Previously we have shown how SIMD extensions used in Intel processors can be used to efficiently implement the, genome comparing, Smith-Waterman algorithm. Here we present distributed version of that algorithm.
Arpith C. Jacob +4 more
openaire +1 more source
Comparative Genomics of Pseudomonas stutzeri Complex: Taxonomic Assignments and Genetic Diversity
Frontiers in Microbiology, 2022 Pseudomonas stutzeri is a species complex with extremely broad phenotypic and genotypic diversity. However, very little is known about its diversity, taxonomy and phylogeny at the genomic scale.
Xiangyang Li +6 more
doaj +1 more source
An improved genome of the model marine alga Ostreococcus tauri unfolds by assessing Illumina de novo assemblies [PDF]
, 2014 Background: Cost effective next generation sequencing technologies now enable the production of genomic datasets for many novel planktonic eukaryotes, representing an understudied reservoir of genetic diversity. O.
Blanc-Mathieu, Romain +14 more
core +6 more sources
Guangxi Zhiwu, 2023 The phylogenetic status of Quercus subg. Cyclobalanopsis has long been controversial and the interspecific relationships of some species are unclear. At present, chloroplast genomes have been used to solve the phylogenetic problems of subg.
Ting HUANG +4 more
doaj +1 more source
Frontiers in Plant Science, 2023 BackgroundAngular leaf spot disease caused by plant pathogenic bacterium Xanthomonas fragariae seriously threatens strawberry crop production globally.MethodsIn this study, we sequenced the whole genome of X. fragariae YM2, isolated from Yunnan Province,
Yue Qiu +17 more
doaj +1 more source