Results 111 to 120 of about 85,734 (198)

The centromere landscapes of four karyotypically diverse Papaver species provide insights into chromosome evolution and speciation

Cell Genomics
Summary: Understanding the roles played by centromeres in chromosome evolution and speciation is complicated by the fact that centromeres comprise large arrays of tandemly repeated satellite DNA, which hinders high-quality assembly.
Shenghan Gao, Yanyan Jia, Hongtao Guo, Tun Xu, Bo Wang, Stephen J. Bush, Shijie Wan, Yimeng Zhang, Xiaofei Yang, Kai Ye   +9 more
doaj   +1 more source

Mitochondrial analysis of oribatid mites provides insights into their atypical tRNA annotation, genome rearrangement and evolution. [PDF]

Parasit Vectors, 2021
Zhan XB, Chen B, Fang Y, Dong FY, Fang WX, Luo Q, Chu LM, Feng R, Wang Y, Su X, Fang Y, Xu JY, Zuo ZT, Xia XQ, Yu JG, Sun ET.   +15 more
europepmc   +1 more source

AGMIAL: implementing an annotation strategy for prokaryote genomes as a distributed system

, 2006
We have implemented a genome annotation system for prokaryotes called AGMIAL. Our approach embodies a number of key principles. First, expert manual annotators are seen as a critical component of the overall system; user interfaces were cyclically ...
Loux, Valentin, S. Chaillou, Hoebeke, Mark,, Maguin, Emmanuelle, K. Bryson, Loux, V., Chaillou, Stéphane, Bessières, P., Bessières, Philippe, Chaillou, Stephane,, Gibrat, J.-F., M. Van De Guchte, Chaillou, S., Gibrat, Jean-François, Hoebeke, M., Penaud, Stéphanie, van de Guchte, M., van de Guchte, Maarten,, Maguin, E., E. Maguin, Penaud, S., P. Nicolas, M. Hoebeke, van de Guchte, Maarten, Bossy, Robert,, Bryson, K., S. Penaud, V. Loux, Bossy, R., Bossy, Robert, R., R. Bossy, Hoebeke, Mark, J-f Gibrat, Nicolas, P.   +33 more
core   +1 more source

A Compact Closed Genome of Orientia tsutsugamushi from Hainan Island, China Provides a TA763_A Reference and Reveals Repeat-Driven Remodeling

Pathogens
Scrub typhus, caused by the obligate intracellular bacterium Orientia tsutsugamushi (O. tsutsugamushi), remains a major public-health concern in the Asia–Pacific region. Genome-wide inference is complicated by extensive repetitive DNA and frequent genome
Yi Niu, Yijia Guo, Zhao Xu, Siqi Chen, Liyuan Zhang, Xiuji Cui, Dachuan Lin, Kwok-Yung Yuen, Jasper Fuk-Woo Chan, Chuanning Tang, Feifei Yin   +10 more
doaj   +1 more source

FluB-RAM and FluB-RANS: Genome Rearrangement as Safe and Efficacious Live Attenuated Influenza B Virus Vaccines. [PDF]

Vaccines (Basel), 2021
Cardenas-Garcia S, Cáceres CJ, Jain A, Geiger G, Mo JS, Jasinskas A, Nakajima R, Rajao DS, Davies DH, Perez DR.   +9 more
europepmc   +1 more source

Assignment of orthologous genes via genome rearrangement [PDF]

, 2005
—The assignment of orthologous genes between a pair of genomes is a fundamental and challenging problem in comparative genomics. Existing methods that assign orthologs based on the similarity between DNA or protein sequences may make erroneous ...
Yang Zhong, Stefano Lonardi, Nan, P, Tao Jiang, Fu, Z, Peng Nan, Chen, X, Jiang, T, Zheng, J, Jie Zheng, Lonardi, S, Zhong, Y, Zheng Fu, Xin Chen   +13 more
core  

Corrigendum: Plastome Evolution and Phylogeny of Orchidaceae, With 24 New Sequences

Frontiers in Plant Science, 2020
Young-Kee Kim, Sangjin Jo, Se-Hwan Cheon, Min-Jung Joo, Ja-Ram Hong, Myounghai Kwak, Ki-Joong Kim   +6 more
doaj   +1 more source

Relaxed DNA substrate specificity of transposases involved in programmed genome rearrangement. [PDF]

Nucleic Acids Res
Walker MWG, Akematsu T, Aslan E, Villano DJ, Fried HS, Lan H, Sternberg SH, Landweber LF.   +7 more
europepmc   +1 more source

Genome architecture, rearrangement and evolution in the ciliate Oxytricha trifallax

, 2015
Genome rearrangements contribute to genome instability that is commonly associated with human diseases, especially cancer. Ciliates are best known for their programmed DNA rearrangements in a single cell that completely rewire a germline into a somatic ...
Chen, Xiao
core  

Annelid Comparative Genomics and the Evolution of Massive Lineage-Specific Genome Rearrangement in Bilaterians. [PDF]

Mol Biol Evol
Lewin TD, Liao IJ, Luo YJ.
europepmc   +1 more source