Insights into the Musa genome: Syntenic relationships to rice and between Musa species [PDF]
Background Musa species (Zingiberaceae, Zingiberales) including bananas and plantains are collectively the fourth most important crop in developing countries.
Santos, Candice M.R. +87 more
core +1 more source
On the weight of indels in genomic distances
Dias Vieira Braga M, Machado R, Ribeiro LC, Stoye J. On the weight of indels in genomic distances. BMC Bioinformatics. 2011;12(Suppl 9: RECOMB-CG 2011): S13.Background: Classical approaches to compute the genomic distance are usually limited to genomes ...
Machado, Raphael +3 more
core +1 more source
An algebraic model for inversion and deletion in bacterial genome rearrangement. [PDF]
Clark C +3 more
europepmc +1 more source
Translational genomics from model species Medicago truncatula to crop legume Trifolium pratense
The legume Trifolium pratense (red clover) is an important fodder crop and produces important secondary metabolites. This makes red clover an interesting species.
Lang Chunting, Chunting
core
Human Papillomaviruses in Buschke-Lowenstein Tumors: Physical State of the DNA and Identification of a Tandem Duplication in the Noncoding Region of a Human Papillomavirus 6 Subtype [PDF]
Six Buschke-Löwenstein tumors, i.e., highly differentiated squamous cell tumors of the genital region, were shown to contain human papillomavirus 6 (HPV 6) or HPV 11 genomes.
Boshart, Michael, Hausen, Harald zur
core
RNA-mediated mechanisms in genome rearrangement
Genome rearrangement is a driving force for evolution. Previous molecular studies on this subject have focused on DNA or chromatin transaction per se, or on protein machineries involved in DNA recombination and repair. Much less is known about the roles
Fang, Wenwen
core
The Janthinobacterium sp. HH01 genome encodes a homologue of the V. cholerae CqsA and L. pneumophila LqsA autoinducer synthases. [PDF]
Janthinobacteria commonly form biofilms on eukaryotic hosts and are known to synthesize antibacterial and antifungal compounds. Janthinobacterium sp. HH01 was recently isolated from an aquatic environment and its genome sequence was established.
Blokesch, Melanie +86 more
core +1 more source
Sorting by reversals and block-interchanges with various weight assignments
Background A classical problem in studying genome rearrangements is understanding the series of rearrangement events involved in transforming one genome into another in accordance with the parsimonious principle when two genomes with the same set of ...
Lin Chunhung, Lin Chun-Yuan, Lin Ying
doaj +1 more source
Intrageneric structural variation in organelle genomes from the genus Dystaenia (Apiaceae): genome rearrangement and mitochondrion-to-plastid DNA transfer. [PDF]
Park S, Park S.
europepmc +1 more source
A new algebraic approach to genome rearrangement models. [PDF]
Terauds V, Sumner J.
europepmc +1 more source

