Results 81 to 90 of about 85,734 (198)

Flexibility and Symmetry of Prokaryotic Genome Rearrangement Reveal Lineage-Associated Core-Gene-Defined Genome Organizational Frameworks

, 2014
The prokaryotic pangenome partitions genes into core and dispensable genes. The order of core genes, albeit assumed to be stable under selection in general, is frequently interrupted by horizontal gene transfer and rearrangement, but how a core-gene ...
Chen, Fei, Yuan, Lina, Gu, Chaohao, Qian, Minping, Khan, Aftab Ahmed, Zhu, Yanmin, Zhang, Zhang, Jiang, Daquan, Wang, Yue, Kang, Yu, Li, Xinna, Xiao, Jingfa, Yu, Jun, Luo, Qibin   +13 more
core   +1 more source

The consequences of reconfiguring the ambisense S genome segment of Rift Valley fever virus on viral replication in mammalian and mosquito cells and for genome packaging [PDF]

, 2013
Rift Valley fever virus (RVFV, family Bunyaviridae) is a mosquito-borne pathogen of both livestock and humans, found primarily in Sub-Saharan Africa and the Arabian Peninsula.
Benjamin Brennan (522804), Brennan, Benjamin, Richard M. Elliott, Richard M Elliott, Welch Stephen R., Elliott, Richard M., Benjamin Brennan, Elliott Richard M., Richard M. Elliott (252934), Stephen R Welch, Stephen R. Welch (522805), Stephen R. Welch, Welch, Stephen R., Brennan Benjamin   +13 more
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Impact of Salmonella genome rearrangement on gene expression. [PDF]

Evol Lett, 2022
Waters EV, Tucker LA, Ahmed JK, Wain J, Langridge GC.   +4 more
europepmc   +2 more sources

Scaffold filling, contig fusion and comparative gene order inference

BMC Bioinformatics, 2010
Background There has been a trend in increasing the phylogenetic scope of genome sequencing without finishing the sequence of the genome. Increasing numbers of genomes are being published in scaffold or contig form.
Rounsley Steve, Albert Victor A, Zhu Qian, Zheng Chunfang, Muñoz Adriana, Sankoff David   +5 more
doaj   +1 more source

Genome-wide tests for introgression between cactophilic Drosophila implicate a role of inversions during speciation [PDF]

, 2015
K.L. was funded by a junior research fellowship from the National Environmental Research Council, UK (NE/I020288/1, NBAF659).Models of speciation-with-gene-flow have shown that the reduction in recombination between alternative chromosome arrangements ...
Etges, William J, Lohse, K., Etges, W.J., Clarke, Magnus, Clarke, M., Ritchie, Michael G., Ritchie, Michael G, Etges, William J., Ritchie, M.G., Lohse, Konrad   +9 more
core   +1 more source

Early vertebrate whole genome duplications were predated by a period of intense genome rearrangement

, 2008
Researchers, supported by data from polyploid plants, have suggested that whole genome duplication (WGD) may induce genomic instability and rearrangement, an idea which could have important implications for vertebrate evolution. Benefiting from the newly
Poustka, A. J., Groth, D., Vingron, Martin, Poustka, Albert, Lehrach, Hans, Poustka, Albert J., Lehrach, H., Hufton, A. L., Panopoulou, G., Hufton, Andrew L., Panopoulou, Georgia, Groth, Detlef, Poustka, A., Vingron, M., Hufton, A.   +14 more
core   +1 more source

On the parameterized complexity of the median and closest problems under some permutation metrics

Algorithms for Molecular Biology
Genome rearrangements are events where large blocks of DNA exchange places during evolution. The analysis of these events is a promising tool for understanding evolutionary genomics, providing data for phylogenetic reconstruction based on genome ...
Luís Cunha, Ignasi Sau, Uéverton Souza
doaj   +1 more source

Reconstructing the genomic architecture of mammalian ancestors using multispecies comparative maps

Human Genomics, 2003
Rapidly developing comparative gene maps in selected mammal species are providing an opportunity to reconstruct the genomic architecture of mammalian ancestors and study rearrangements that transformed this ancestral genome into existing mammalian ...
Murphy William J, Bourque Guillaume, Tesler Glenn, Pevzner Pavel, O'Brien Stephen J   +4 more
doaj   +1 more source

Genomic distance under gene substitutions

, 2011
Dias Vieira Braga M, Machado R, Ribeiro LC, Stoye J. Genomic distance under gene substitutions. BMC Bioinformatics. 2011;12(Suppl 9: Proc. of RECOMB-CG 2011): S8.Background: The distance between two genomes is often computed by comparing only the common
Stoye Jens, Braga Marília D V, Jens Stoye, Machado, Raphael, Marília D V Braga, Stoye, Jens ; https://orcid.org/, Raphael Machado, Leonardo C Ribeiro, Machado Raphael, Dias Vieira Braga, Marília, Ribeiro, Leonardo C., Ribeiro Leonardo C   +11 more
core   +1 more source

Detection and impact of genome rearrangement in Salmonella [PDF]

, 2021
The species Salmonella enterica subspecies enterica is responsible for both localised gastrointestinal infections (commonly referred to as food poisoning) and severe systemic infections.
Tucker, Liam
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