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Beyond Genetic Indicators: How Reproductive Mode and Hybridisation Challenge Freshwater Mussel Conservation. [PDF]
Faust E +6 more
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Genomic analysis reveals genetic diversity and selection signatures of the Yantai Black pig during domestication and breeding. [PDF]
Qin M +12 more
europepmc +1 more source
Persistent Genomic Erosion in Whooping Cranes Despite Demographic Recovery. [PDF]
Fontsere C +19 more
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2023
Background: Consecutive homozygous fragments of a genome inherited by offspring from a common ancestor are known as runs of homozygosity (ROH). ROH can be used to calculate genomic inbreeding and to identify genomic regions that are potentially under historical selection pressure. The dataset of our study consisted of 254 Azeri (AZ) and 115 Khuzestani (
GHOREISHIFAR, Seyed Mohammad +5 more
openaire +1 more source
Background: Consecutive homozygous fragments of a genome inherited by offspring from a common ancestor are known as runs of homozygosity (ROH). ROH can be used to calculate genomic inbreeding and to identify genomic regions that are potentially under historical selection pressure. The dataset of our study consisted of 254 Azeri (AZ) and 115 Khuzestani (
GHOREISHIFAR, Seyed Mohammad +5 more
openaire +1 more source
2023
A total of 32 individual samples of Hetian Qing donkeys were collected in this study, including 4 male donkeys and 28 female donkeys. Genotype data were collected by the Simplified Genome Sequencing (GBS) technology, and then genetic diversity, genetic structure, inbreeding degree and family analysis were carried out. The results showed that a total of
Bo Liu +6 more
openaire +1 more source
A total of 32 individual samples of Hetian Qing donkeys were collected in this study, including 4 male donkeys and 28 female donkeys. Genotype data were collected by the Simplified Genome Sequencing (GBS) technology, and then genetic diversity, genetic structure, inbreeding degree and family analysis were carried out. The results showed that a total of
Bo Liu +6 more
openaire +1 more source
Biological Rhythm Research, 2019
In the present study, to analyze the genomic ROH fragments, haplotypes, inbreeding coefficient and effective population size (Ne), SNP50K data of 72 Vrindavani crossbred cattle strain were obtained...
Supriya Chhotaray +10 more
openaire +1 more source
In the present study, to analyze the genomic ROH fragments, haplotypes, inbreeding coefficient and effective population size (Ne), SNP50K data of 72 Vrindavani crossbred cattle strain were obtained...
Supriya Chhotaray +10 more
openaire +1 more source
Genome-wide heterozygosity and pedigree inbreeding coefficients in Simmental cattle population
2010The main goal of this study was to analyse relationship between individual genome-wide heterozygosity and FPED in artificially selected population, here Simmental (Flechvieh) bulls, as well as to analyse the trend in heterozygosity and inbreeding over a period of 30 years period. *
Čurik, Ino, Ferenčaković, Maja
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Yi chuan = Hereditas, 2017
In livestock, inbreeding coefficient based on pedigree information is usually used to evaluate the level of inbreeding. Recently, with cost reduction of high-density SNP genotyping, it's possible to analyze real genomic inbreeding degree using genomic information.
Zhan-cheng, Yang +8 more
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In livestock, inbreeding coefficient based on pedigree information is usually used to evaluate the level of inbreeding. Recently, with cost reduction of high-density SNP genotyping, it's possible to analyze real genomic inbreeding degree using genomic information.
Zhan-cheng, Yang +8 more
openaire +1 more source
Efficient computation of genomically-enhanced inbreeding coefficients
2014Faux, Pierre, Gengler, Nicolas
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