Results 1 to 10 of about 55,012 (170)
GPU acceleration of Darwin read overlapper for de novo assembly of long DNA reads [PDF]
BMC Bioinformatics, 2020 Background In Overlap-Layout-Consensus (OLC) based de novo assembly, all reads must be compared with every other read to find overlaps. This makes the process rather slow and limits the practicality of using de novo assembly methods at a large scale in ...
Nauman Ahmed +3 more
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GPU Acceleration of Melody Accurate Matching in Query-by-Humming [PDF]
The Scientific World Journal, 2014 With the increasing scale of the melody database, the query-by-humming system faces the trade-offs between response speed and retrieval accuracy. Melody accurate matching is the key factor to restrict the response speed.
Limin Xiao +4 more
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Evaluating the Power of GPU Acceleration for IDW Interpolation Algorithm [PDF]
The Scientific World Journal, 2014 We first present two GPU implementations of the standard Inverse Distance Weighting (IDW) interpolation algorithm, the tiled version that takes advantage of shared memory and the CDP version that is implemented using CUDA Dynamic Parallelism (CDP).
Gang Mei
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Accelerating AutoDock VINA with GPUs [PDF]
Molecules, 2022 AutoDock Vina is one of the most popular molecular docking tools. In the latest benchmark CASF-2016 for comparative assessment of scoring functions, AutoDock Vina won the best docking power among all the docking tools. Modern drug discovery is facing the most common scenario on large virtual screening of drug hits from huge compound databases.
Shidi Tang +8 more
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GPU-HADVPPM V1.0: a high-efficiency parallel GPU design of the piecewise parabolic method (PPM) for horizontal advection in an air quality model (CAMx V6.10) [PDF]
Geoscientific Model Development, 2023 With semiconductor technology gradually approaching its physical and thermal limits, graphics processing units (GPUs) are becoming an attractive solution for many scientific applications due to their high performance.
K. Cao +7 more
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IEEE Journal of Selected Topics in Applied Earth Observations and Remote Sensing, 2023 Orthorectification reflects a large amount of real and objective information, such as the characteristics of images and the geometric accuracy of maps. Conducting a large batch of orthorectification is a process with high time cost owing to the pixelwise
Ruyan Zhou +9 more
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Parallel WMD Algorithm Based on GPU Acceleration [PDF]
Jisuanji kexue, 2021 Word Mover's Distance (WMD) is a method of measuring text similarity.It defines the difference between two texts as the minimum distance between the word embedding vectors of the text.WMD uses the vocabulary to represent the text as a normalized bag-of ...
HU Rong, YANG Wang-dong, WANG Hao-tian, LUO Hui-zhang, LI Ken-li
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MIMO Radar Parallel Simulation System Based on CPU/GPU Architecture
Sensors, 2022 The data volume and computation task of MIMO radar is huge; a very high-speed computation is necessary for its real-time processing. In this paper, we mainly study the time division MIMO radar signal processing flow, propose an improved MIMO radar signal
Gaogao Liu +8 more
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PhotoNs-GPU: A GPU accelerated cosmological simulation code [PDF]
Research in Astronomy and Astrophysics, 2021 Abstract We present a GPU-accelerated cosmological simulation code, PhotoNs-GPU, based on an algorithm of Particle Mesh Fast Multipole Method (PM-FMM), and focus on the GPU utilization and optimization. A proper interpolated method for truncated gravity is introduced to speed up the special functions in kernels. We verify the GPU code in
Wang, Qiao, Meng, Chen
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IEEE Open Journal of the Communications Society, 2023 Currently, with the widespread of the intelligent Internet of Things (IoT) in beyond 5G, wireless federated learning (WFL) has attracted a lot of attention to enable knowledge construction and sharing among a huge amount of distributed edge devices ...
Zihong Li +4 more
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