Results 161 to 170 of about 88,365 (297)

ColabCuraTE: an easy-to-use, web-based pipeline for the manual curation of transposable elements. [PDF]

Mob DNA
Travers SL, Khansa A, Ellison CE.
europepmc   +1 more source

Improving the outcomes for Gypsy, Roma and Traveller pupils : final report [PDF]

, 2010
Derrington, Chris, Foster, Brian, Kinder, Kay, Martin, Kerry, Rutt, Simon, White, Richard, Wilkin, Anne   +6 more
core   +1 more source

Chromosome‐Scale Haplotype Genome Assemblies for the Australian Mango ‘Kensington Pride’ and a Wild Relative, Mangifera laurina, Provide Insights Into Anthracnose‐Resistance and Volatile Compound Biosynthesis Genes

Plant Biotechnology Journal, EarlyView.
ABSTRACT Mango (Mangifera indica) is one of the most popular fruits cultivated in tropical and subtropical regions of the world. The availability of reference genomes helps to identify the genetic basis of important traits. Here, we report assembled high‐quality chromosome‐level genomes for the Australian mango cultivar ‘Kensington Pride’ and M ...
Upendra Kumari Wijesundara, Agnelo Furtado, Ardashir Kharabian Masouleh, Natalie L. Dillon, Heather E. Smyth, Robert J. Henry   +5 more
wiley   +1 more source

Haplotype-Resolved Chromatin Conformation Data Reveals Relationship Between Transposable Elements and Chromosomal Pairing. [PDF]

Genome Biol Evol
Genutis LK, Villanueva P, Graze RM, AlHaj Abed J, McIntyre LM, Nuzhdin SV.   +5 more
europepmc   +1 more source

Differential LTR-retrotransposon dynamics across polyploidization, speciation, domestication, and improvement of cotton (Gossypium). [PDF]

Genome Biol
Campos-Dominguez L, Castanera R, Grover CE, Wendel JF, Casacuberta JM.   +4 more
europepmc   +1 more source

PlantCTCIP: Chromatin Interaction Prediction Using Convolutional Neural Network and Transformer in Plants

Plant Biotechnology Journal, EarlyView.
ABSTRACT Chromatin interactions establish spatial proximity between distant regulatory elements and their target genes, significantly influencing gene expression, and phenotypic traits. In this study, we present a plant chromatin interaction prediction model called PlantCTCIP based on Convolutional Neural Networks and Transformer.
Zhenye Wang, Siyu Zhou, Ze Guo, Zilan Ning, Jiaqi Cai, Ran Zhao, Ao Xie, Quan Li, Jiangling Zhang, Yongsheng Zhao, Peizhang Li, Haiping Si, Jianbing Yan, Yong Peng, Jianxiao Liu   +14 more
wiley   +1 more source

Largest genome assembly in Brassicaceae: retrotransposon-driven genome expansion and karyotype evolution in Matthiola incana. [PDF]

Plant Biotechnol J
Chen D, Yang T, Chen H, Zhang X, Huang F, Wan S, Lu Z, Liu C, Lei Y, Jiang H, Liao B, King GJ, Lysak MA, Tan C, Ge X.   +14 more
europepmc   +1 more source

Chromosome‐Level Genome and Organ‐Specific Transcriptome of Alnus glutinosa Uncover Lineage‐Specific Innovations in Root Nodule Symbiosis

Plant, Cell &Environment, EarlyView.
ABSTRACT Alnus glutinosa is one of only three lineages within the order Fagales capable of establishing root nodule symbiosis (RNS). Although a fragmented genome assembly of A. glutinosa was previously available, its limited quality, combined with the lack of comprehensive transcriptomic resources, has constrained in‐depth comparative and functional ...
Zijian Liu, Xiaoxiao Zhao, Xiuli li, Yong Feng, Linnan Wu, Zhen Wu, Yao Zhong, Qingcheng Qiu, Bo Song, Hang Zhao, Hongbing Liu, Shifeng Cheng   +11 more
wiley   +1 more source

Transposon Dynamics Drive Genome Evolution and Regulate Genetic Mechanisms of Agronomic Traits in Cotton. [PDF]

Plants (Basel)
Dong Z, Jin S, Hao Y, Zhao T, Shang H, Zhang Z, Fang L, Zheng Z, Li J.   +8 more
europepmc   +1 more source

The Material and Textual Value of Manuscript and Print Binding Waste☆

Renaissance Studies, EarlyView.
Abstract In 2019, the Foundation of Christ's Hospital at Lincoln made a bequest of early printed books to the Bodleian Library. The collection is rich in sixteenth‐century tooled bindings, many of which preserve manuscript and printed waste in the form of pastedowns, endleaves and endleaf guards.
Tamara Atkin
wiley   +1 more source