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Structure, function and diversity of the healthy human microbiome
Nature, 2012 Studies of the human microbiome have revealed that even healthy individuals differ remarkably in the microbes that occupy habitats such as the gut, skin and vagina. Much of this diversity remains unexplained, although diet, environment, host genetics and C. Huttenhower, D. Gevers, R. Knight, Sahar Abubucker, J. Badger, A. Chinwalla, H. Creasy, A. Earl, Michael G. Fitzgerald, R. Fulton, M. Giglio, Kymberlie Hallsworth-Pepin, E. Lobos, R. Madupu, V. Magrini, John Martin, M. Mitreva, D. Muzny, E. Sodergren, J. Versalovic, A. Wollam, K. Worley, J. Wortman, Sarah K. Young, Qiandong Zeng, K. Aagaard, Olukemi O. Abolude, E. Allen-Vercoe, E. Alm, Lucia Alvarado, G. Andersen, S. Anderson, Elizabeth L. Appelbaum, H. Arachchi, G. Armitage, Cesar Arze, T. Ayvaz, Carl C. Baker, L. Begg, Tsegahiwot Belachew, Veena Bhonagiri, Monika Bihan, M. Blaser, Toby Bloom, Vivien R. Bonazzi, J. Brooks, G. Buck, C. Buhay, D. Busam, Joseph L. Campbell, S. Canon, B. Cantarel, P. Chain, I. Chen, Lei Chen, Shaila Chhibba, Ken Chu, Dawn M. Ciulla, J. Clemente, S. Clifton, S. Conlan, J. Crabtree, M. Cutting, Noam J. Davidovics, Catherine C. Davis, T. DeSantis, C. Deal, Kimberley D. Delehaunty, F. Dewhirst, E. Deych, Yan Ding, D. Dooling, Shannon P. Dugan, W. Dunne, A. S. Durkin, Robert C. Edgar, R. Erlich, Candace N. Farmer, R. Farrell, Karoline Faust, M. Feldgarden, Victor Felix, Sheila A Fisher, A. Fodor, L. Forney, Les Foster, V. D. Francesco, Jonathan Friedman, Dennis C. Friedrich, C. Fronick, L. Fulton, Hongyu Gao, Nathalia Garcia, G. Giannoukos, C. Giblin, Maria Y. Giovanni, J. Goldberg, Johannes Goll, Antonio Gonzalez, Allison D. Griggs, Sharvari Gujja, S. Haake, B. Haas, Holli A. Hamilton, Emily L. Harris, Theresa A. Hepburn, Brandi N. Herter, D. Hoffmann, M. Holder, Clinton Howarth, Katherine H. Huang, Susan M. Huse, J. Izard, J. Jansson, Huaiyang Jiang, Catherine Jordan, Vandita Joshi, J. Katancik, W. Keitel, S. Kelley, C. Kells, N. King, D. Knights, H. Kong, O. Koren, S. Koren, Karthik Kota, C. Kovar, N. Kyrpides, P. S. Rosa, Sandy Lee, K. P. Lemon, N. Lennon, Cecil M. Lewis, L. Lewis, R. Ley, Kelvin Li, K. Liolios, Bo Liu, Yue Liu, C. Lo, C. Lozupone, R. Lunsford, T. Madden, A. Mahurkar, P. Mannon, E. Mardis, V. Markowitz, K. Mavromatis, J. McCorrison, Daniel McDonald, J. Mcewen, A. McGuire, P. Mcinnes, Teena Mehta, K. Mihindukulasuriya, J. Miller, P. Minx, I. Newsham, C. Nusbaum, M. O'Laughlin, Joshua Orvis, I. Pagani, Krishna Palaniappan, Shital M. Patel, Matthew D. Pearson, Jane L. Peterson, M. Podar, C. Pohl, K. Pollard, Mihai Pop, M. Priest, L. Proctor, X. Qin, J. Raes, J. Ravel, J. Reid, Mina Rho, R. Rhodes, Kevin P. Riehle, M. Rivera, B. Rodriguez-Mueller, Y. Rogers, M. C. Ross, C. Russ, Ravi K. Sanka, P. Sankar, J. Sathirapongsasuti, J. Schloss, P. Schloss, T. Schmidt, M. Scholz, L. Schriml, Alyxandria M. Schubert, N. Segata, J. Segre, W. Shannon, R. Sharp, T. Sharpton, N. Shenoy, N. Sheth, Gina A. Simone, Indresh Singh, C. Smillie, J. Sobel, Daniel D. Sommer, P. Spicer, G. Sutton, S. Sykes, D. Tabbaa, M. Thiagarajan, Chad Tomlinson, M. Torralba, Todd J. Treangen, R. Truty, T. Vishnivetskaya, Jason R. Walker, Lu Wang, Zhengyuan O. Wang, D. Ward, W. Warren, M. Watson, Christopher Wellington, K. Wetterstrand, J. White, Katarzyna Wilczek-Boney, Yuanqing Wu, K. Wylie, T. Wylie, C. Yandava, Liang Ye, Yuzhen Ye, Shibu Yooseph, Bonnie P. Youmans, Lan Zhang, Yanjiao Zhou, Yiming Zhu, L. Zoloth, Jeremy D. Zucker, B. Birren, R. Gibbs, S. Highlander, B. Methé, K. Nelson, J. Petrosino, G. Weinstock, R. Wilson, O. White +247 moreexaly +2 more sourcesThe Human Microbiome [PDF]
Global Advances in Health and Medicine, 2014 In 2011, at the Society for Integrative Oncology's international meeting in Cleveland, Ohio, Francis Collins, PhD, head of the National Institutes of Health, shocked the audience when he asserted that although his work in the human genome was exciting, he was more impressed by the potential represented by the National Institutes of Health's investment ...Gregory A. Plotnikoff, David R. Rileyopenalex +5 more sourcesCurrent understanding of the human microbiome [PDF]
Nature Medicine, 2018 Our understanding of the link between the human microbiome and disease, including obesity, inflammatory bowel disease, arthritis and autism, is rapidly expanding.J. Gilbert, J. Gilbert, J. Gilbert, M. Blaser, J. Caporaso, J. Jansson, S. Lynch, R. Knight +7 moresemanticscholar +6 more sourcesA framework for human microbiome research [PDF]
Nature, 2012 A variety of microbial communities and their genes (the microbiome) exist throughout the human body, with fundamental roles in human health and disease. The National Institutes of Health (NIH)-funded Human Microbiome Project Consortium has established a ...B. Methé, K. Nelson, Mihai Pop, H. Creasy, M. Giglio, C. Huttenhower, D. Gevers, J. Petrosino, Sahar Abubucker, J. Badger, A. Chinwalla, A. Earl, Michael G. Fitzgerald, R. Fulton, Kymberlie Hallsworth-Pepin, E. Lobos, R. Madupu, V. Magrini, John C. Martin, M. Mitreva, D. Muzny, E. Sodergren, J. Versalovic, A. Wollam, K. Worley, J. Wortman, Sarah K. Young, Qiandong Zeng, K. Aagaard, Olukemi O. Abolude, E. Allen-Vercoe, E. Alm, Lucia Alvarado, G. Andersen, S. Anderson, Elizabeth L. Appelbaum, H. Arachchi, G. Armitage, Cesar Arze, T. Ayvaz, Carl C. Baker, L. Begg, Tsegahiwot Belachew, Veena Bhonagiri, Monika Bihan, M. Blaser, Toby Bloom, J. Vivien Bonazzi, Paul Brooks, G. Buck, C. Buhay, D. Busam, Joseph L. Campbell, S. Canon, B. Cantarel, P. Chain, I. Chen, Lei Chen, Shaila Chhibba, Ken Chu, Dawn M. Ciulla, J. Clemente, S. Clifton, S. Conlan, J. Crabtree, M. Cutting, Noam J. Davidovics, Catherine C. Davis, T. DeSantis, C. Deal, Kimberley D. Delehaunty, F. Dewhirst, E. Deych, Yan Ding, D. Dooling, Shannon P. Dugan, W. Dunne, A. S. Durkin, Robert C. Edgar, R. Erlich, Candace N. Farmer, R. Farrell, Karoline Faust, M. Feldgarden, Victor Felix, Sheila A Fisher, A. Fodor, L. Forney, Les Foster, V. Di Francesco, Jonathan Friedman, Dennis C. Friedrich, C. Fronick, L. Fulton, Hongyu Gao, Nathalia Garcia, G. Giannoukos, C. Giblin, Maria Y. Giovanni, J. Goldberg, Johannes Goll, Antonio Gonzalez, Allison D. Griggs, Sharvari Gujja, B. Haas, Holli A. Hamilton, Emily L. Harris, Theresa A. Hepburn, Brandi N. Herter, D. Hoffmann, M. Holder, Clinton Howarth, Katherine H. Huang, Susan M. Huse, J. Izard, J. Jansson, Huaiyang Jiang, Catherine Jordan, Vandita Joshi, J. Katancik, W. Keitel, S. Kelley, C. Kells, Susan Kinder-Haake, N. King, R. Knight, D. Knights, H. Kong, O. Koren, S. Koren, Karthik Kota, C. Kovar, N. Kyrpides, Patricio S. La Rosa, Sandy Lee, K. P. Lemon, N. Lennon, Cecil M. Lewis, L. Lewis, R. Ley, Kelvin Li, K. Liolios, Bo Liu, Yue Liu, C. Lo, C. Lozupone, R. Lunsford, T. Madden, A. Mahurkar, P. Mannon, E. Mardis, V. Markowitz, K. Mavrommatis, J. McCorrison, Daniel McDonald, J. Mcewen, A. McGuire, P. Mcinnes, Teena Mehta, K. Mihindukulasuriya, J. Miller, P. Minx, I. Newsham, C. Nusbaum, M. O'Laughlin, Joshua Orvis, I. Pagani, Krishna Palaniappan, Shital M. Patel, Matthew D. Pearson, Jane L. Peterson, M. Podar, C. Pohl, K. Pollard, M. Priest, L. Proctor, X. Qin, J. Raes, J. Ravel, J. Reid, Mina Rho, R. Rhodes, Kevin P. Riehle, M. Rivera, B. Rodriguez-Mueller, Y. Rogers, M. C. Ross, C. Russ, Ravi K. Sanka, J. Pamela Sankar, Fah Sathirapongsasuti, J. Schloss, P. Schloss, T. Schmidt, M. Scholz, L. Schriml, Alyxandria M. Schubert, N. Segata, J. Segre, W. Shannon, R. Sharp, T. Sharpton, N. Shenoy, N. Sheth, Gina A. Simone, Indresh Singh, C. Smillie, J. Sobel, Daniel D. Sommer, P. Spicer, G. Sutton, S. Sykes, D. Tabbaa, M. Thiagarajan, Chad Tomlinson, M. Torralba, Todd J. Treangen, R. Truty, T. Vishnivetskaya, Jason R. Walker, Lu Wang, Zhengyuan O. Wang, D. Ward, W. Warren, M. Watson, Christopher Wellington, K. Wetterstrand, J. White, Katarzyna Wilczek-Boney, Yuanqing Wu, K. Wylie, T. Wylie, C. Yandava, Liang Ye, Yuzhen Ye, Shibu Yooseph, Bonnie P. Youmans, Lan Zhang, Yanjiao Zhou, Yiming Zhu, L. Zoloth, Jeremy D. Zucker, B. Birren, R. Gibbs, S. Highlander, G. Weinstock, R. Wilson, O. White +247 moresemanticscholar +8 more sourcesThe human microbiome
Advances in Medical Sciences, 2017 Until recently, human microbiology was based on the identification of single microbes, such as bacteria, fungi and viruses, frequently isolated from patients with acute or chronic infections. Novel culture-independent molecular biochemical analyses (genomics, transcriptomics, proteomics, metabolomics) allow today to detect and classify the diverse ...M. Malinowska, B. Tokarz-Deptuła, W. Deptuła +2 moresemanticscholar +8 more sourcesThe Integrative Human Microbiome Project
Nature, 2019 The NIH Human Microbiome Project (HMP) has been carried out over ten years and two phases to provide resources, methods, and discoveries that link interactions between humans and their microbiomes to health-related outcomes. The recently completed second Lita M. Heather H. Jennifer M. Jason Anup Wenyu Gregory Proctor Creasy Fettweis Lloyd-Price Mahurkar Zhou , L. Proctor, H. Creasy, Jennifer M. Fettweis, J. Lloyd-Price, A. Mahurkar, Wenyu Zhou, G. Buck, M. Snyder, J. Strauss, G. Weinstock, O. White, C. Huttenhower +12 moreexaly +2 more sources
