Internal Transcribed Spacer (ITS) Fails Barcoding of the Genus Neotinea Rchb.f. (Orchidaceae)
Journal of Agricultural Sciences, 2021 Internal Transcribed Spacer (ITS) is one of the most used barcoding regions for the molecular phylogenetics and barcoding of orchids. Our aim in this study is to test the reliability of ITS on barcoding of closely related Neotinea spp., including ...
Kaan Hürkan, Kemal Melih Taşkın
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Molecular phylogeny of Oncaeidae (Copepoda) using nuclear ribosomal internal transcribed spacer (ITS rDNA). [PDF]
PLoS ONE, 2017 Copepods belonging to the Oncaeidae family are commonly and abundantly found in marine zooplankton. In the Mediterranean Sea, forty-seven oncaeid species occur, of which eleven in the Gulf of Naples.
Iole Di Capua +5 more
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Evaluating the ribosomal internal transcribed spacer (ITS) as a candidate dinoflagellate barcode marker. [PDF]
PLoS ONE, 2012 DNA barcoding offers an efficient way to determine species identification and to measure biodiversity. For dinoflagellates, an ancient alveolate group of about 2000 described extant species, DNA barcoding studies have revealed large amounts of ...
Rowena F Stern +12 more
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Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for Fungi. [PDF]
Proc Natl Acad Sci U S A, 2012 Six DNA regions were evaluated as potential DNA barcodes for Fungi, the second largest kingdom of eukaryotic life, by a multinational, multilaboratory consortium.
Schoch CL +8 more
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Banana Classification Using Sanger Sequencing of the Ribosomal DNA Internal Transcribed Spacer (ITS) Region [PDF]
PlantsBanana (Musa spp.) is one of the most economically important horticultural crops. There are many types of banana, with differing ploidy (usually diploid, triploid, or tetraploid) and genome types (most containing the A or/and B genome).
Hongyun Zeng +3 more
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Species-specific identification of Pseudomonas based on 16S–23S rRNA gene internal transcribed spacer (ITS) and its combined application with next-generation sequencing [PDF]
BMC Microbiology, 2022 Background Pseudomonas species are widely distributed in the human body, animals, plants, soil, fresh water, seawater, etc. Pseudomonas aeruginosa is one of the main pathogens involved in nosocomial infections.
Shuqian Hu +6 more
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New records of powdery mildew fungi on stone fruits from India [PDF]
Scientific ReportsPowdery mildew disease is one of the major fungal diseases, affecting most of the crops including stone fruits. Due to their economical significance, the precise identification proof of the causal fungus is fundamental for their effective control ...
Sana Surma +7 more
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Plant and Fungal Systematics, 2020 We tested the functionality of ITS-based DNA barcoding in lichen fungi using Colombian samples of the genus Usnea as an example. New ITS sequences were generated for 15 samples from five localities in two different ecoregions, representing varying ...
Bibiana Moncada +2 more
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Evaluation of the ribosomal DNA internal transcribed spacer (ITS), specifically ITS1 and ITS2, for the analysis of fungal diversity by deep sequencing. [PDF]
PLoS One, 2018 Yang RH +6 more
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Phytotaxa, 2022 There are four species of Artemisia known in Ethiopia, namely A. schimperi (endemic), A. abyssinica, A. afra and A. absinthium (syn. A. rehan). All these species occurred naturally except A. absinthium, which usually grows in private gardens. The main objective of this study was to reconstruct the molecular phylogeny to determine phylogenetic positions
Mistire Yifru +4 more
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