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Intrinsically Disordered Proteins and Their “Mysterious” (Meta)Physics

open access: yesFrontiers in Physics, 2019
Recognition of the natural abundance and functional importance of intrinsically disordered proteins (IDPs), and protein hybrids that contain both intrinsically disordered protein regions (IDPRs) and ordered regions, is changing protein science.
Vladimir N. Uversky, Vladimir N. Uversky
doaj   +2 more sources

Intrinsically Disordered Proteins in Chronic Diseases [PDF]

open access: yesBiomolecules, 2019
It is now increasingly evident that a large fraction of the human proteome comprises proteins that, under physiological conditions, lack fixed, ordered 3D structures as a whole or have segments that are not likely to form a defined 3D structure [...]
Prakash Kulkarni, Vladimir N. Uversky
doaj   +5 more sources

Intrinsically Disordered Proteins and the Janus Challenge [PDF]

open access: yesBiomolecules, 2018
To gain a new insight into the role of proteins in the origin of life on Earth, we present the Janus Challenge: identify an intrinsically disordered protein (IDP), naturally occurring or synthetic, that has catalytic activity.
Prakash Kulkarni, Vladimir N. Uversky
doaj   +5 more sources

Templated folding of intrinsically disordered proteins [PDF]

open access: yesJournal of Biological Chemistry, 2020
Much of our current knowledge of biological chemistry is founded in the structure-function relationship, whereby sequence determines structure that determines function. Thus, the discovery that a large fraction of the proteome is intrinsically disordered,
A. Toto   +7 more
semanticscholar   +6 more sources

Targeting Intrinsically Disordered Proteins through Dynamic Interactions

open access: yesBiomolecules, 2020
Intrinsically disordered proteins (IDPs) are over-represented in major disease pathways and have attracted significant interest in understanding if and how they may be targeted using small molecules for therapeutic purposes.
Jianlin Chen, Xiaorong Liu, Jianhan Chen
doaj   +2 more sources

Intrinsically disordered proteins and structured proteins with intrinsically disordered regions have different functional roles in the cell.

open access: yesPLoS ONE, 2019
Many studies about classification and the functional annotation of intrinsically disordered proteins (IDPs) are based on either the occurrence of long disordered regions or the fraction of disordered residues in the sequence.
Antonio Deiana   +3 more
doaj   +2 more sources

Artificial intelligence guided conformational mining of intrinsically disordered proteins

open access: yesCommunications Biology, 2022
Generative autoencoders create full conformational ensembles of intrinsically disordered proteins from short molecular dynamics simulations.
Aayush Gupta   +3 more
doaj   +2 more sources

Intrinsic disorder in putative protein sequences [PDF]

open access: goldProteome Science, 2012
Intrinsically disordered proteins (IDPs) and regions (IDRs) perform a variety of crucial biological functions despite lacking stable tertiary structure under physiological conditions in vitro. State-of-the-art sequence-based predictors of intrinsic disorder are achieving per-residue accuracies over 80%.
Uros Midic, Zoran Obradović
openalex   +7 more sources

Intrinsically Disordered Proteins in Biomineralization [PDF]

open access: hybrid, 2012
Intrinsically disordered proteins (IDPs) have the potential to play a unique role in the study of proteins and the relationships between structure and function. Intrinsic disorder affects chemical and cellular events such as cell signaling, macromolecular self-assembly, protein removal and crystal nucleation and growth.
Magdalena Wojtas   +2 more
openalex   +4 more sources

Databases for intrinsically disordered proteins [PDF]

open access: yesActa Crystallographica Section D Structural Biology, 2022
Intrinsically disordered regions (IDRs) lacking a fixed three-dimensional protein structure are widespread and play a central role in cell regulation. Only a small fraction of IDRs have been functionally characterized, with heterogeneous experimental evidence that is largely buried in the literature.
Piovesan, Damiano   +3 more
openaire   +2 more sources

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