Results 41 to 50 of about 410,023 (357)

Physics-based computational and theoretical approaches to intrinsically disordered proteins.

open access: yesCurrent Opinion in Structural Biology, 2021
Intrinsically disordered proteins (IDPs) are an important class of proteins that do not fold to a well-defined three-dimensional shape but rather adopt an ensemble of inter-converting conformations.
J. Shea, R. Best, J. Mittal
semanticscholar   +1 more source

A creature with a hundred waggly tails: intrinsically disordered proteins in the ribosome [PDF]

open access: yes, 2013
This article is made available for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source.
Dunker, A. Keith   +6 more
core   +2 more sources

Identification of Intrinsically Disordered Proteins and Regions in a Non-Model Insect Species Ostrinia nubilalis (Hbn.)

open access: yesBiomolecules, 2022
Research in previous decades has shown that intrinsically disordered proteins (IDPs) and regions in proteins (IDRs) are as ubiquitous as highly ordered proteins. Despite this, research on IDPs and IDRs still has many gaps left to fill.
Miloš Avramov   +7 more
doaj   +1 more source

Recent Force Field Strategies for Intrinsically Disordered Proteins

open access: yesJournal of Chemical Information and Modeling, 2021
Intrinsically disordered proteins (IDPs) are widely distributed across eukaryotic cells, playing important roles in molecular recognition, molecular assembly, post-translational modification, and other biological processes.
Junxi Mu   +4 more
semanticscholar   +1 more source

Fairy tails: Flexibility and function of intrinsically disordered extensions in the photosynthetic world

open access: yesFrontiers in Molecular Biosciences, 2015
Intrinsically Disordered Proteins (IDPs), or protein fragments also called Intrinsically Disordered Regions (IDRs), display high flexibility as the result of their amino acid composition. They can adopt multiple roles.
Gabriel eThieulin-Pardo   +3 more
doaj   +1 more source

Targeting Intrinsically Disordered Proteins through Dynamic Interactions

open access: yesBiomolecules, 2020
Intrinsically disordered proteins (IDPs) are over-represented in major disease pathways and have attracted significant interest in understanding if and how they may be targeted using small molecules for therapeutic purposes.
Jianlin Chen, Xiaorong Liu, Jianhan Chen
doaj   +1 more source

Uncovering non-random binary patterns within sequences of intrinsically disordered proteins.

open access: yesJournal of Molecular Biology, 2021
Sequence-ensemble relationships of intrinsically disordered proteins (IDPs) are governed by binary patterns such as the linear clustering or mixing of specific residues or residue types with respect to one another.
Megan C. Cohan   +3 more
semanticscholar   +1 more source

DisBind: A database of classified functional binding sites in disordered and structured regions of intrinsically disordered proteins

open access: yesBMC Bioinformatics, 2017
Background Intrinsically unstructured or disordered proteins function via interacting with other molecules. Annotation of these binding sites is the first step for mapping functional impact of genetic variants in coding regions of human and other genomes,
Jia-Feng Yu   +8 more
doaj   +1 more source

On the roles of intrinsically disordered proteins and regions in cell communication and signaling

open access: yesCell Communication and Signaling, 2021
For proteins, the sequence → structure → function paradigm applies primarily to enzymes, transmembrane proteins, and signaling domains. This paradigm is not universal, but rather, in addition to structured proteins, intrinsically disordered proteins and ...
Sarah E. Bondos, A. Dunker, V. Uversky
semanticscholar   +1 more source

Constructing ensembles for intrinsically disordered proteins [PDF]

open access: yes, 2011
The relatively flat energy landscapes associated with intrinsically disordered proteins makes modeling these systems especially problematic. A comprehensive model for these proteins requires one to build an ensemble consisting of a finite collection of ...
Fisher, Charles K., Stultz, Collin M.
core   +1 more source

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