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The ITS2 Database [PDF]

open access: yesJournal of Visualized Experiments, 2012
The internal transcribed spacer 2 (ITS2) has been used as a phylogenetic marker for more than two decades. As ITS2 research mainly focused on the very variable ITS2 sequence, it confined this marker to low-level phylogenetics only.
Förster, Frank   +8 more
core   +5 more sources

A database for ITS2 sequences from nematodes [PDF]

open access: yesBMC Genetics, 2020
Background Marker gene surveys have a wide variety of applications in species identification, population genetics, and molecular epidemiology. As these methods expand to new types of organisms and additional markers beyond 16S and 18S rRNA genes ...
Zhu, Shawna   +10 more
core   +5 more sources

The ITS2 Database III-sequences and structures for phylogeny [PDF]

open access: yesNucleic Acids Research, 2010
The internal transcribed spacer 2 (ITS2) is a widely used phylogenetic marker. In the past, it has mainly been used for species level classifications. Nowadays, a wider applicability becomes apparent.
Schwarz, Roland   +17 more
core   +5 more sources

Holmes-ITS2: Consolidated ITS2 resources and search engines for plant DNA-based marker analyses [PDF]

open access: yes, 2018
Plants are valuable resources for a variety of products in modern societies. Plant species identification is an integral part of research and practical application on plants.
Hong Bai   +4 more
core   +2 more sources

The ITS2 Database - Application and Extension [PDF]

open access: yes, 2007
Der internal transcribed spacer 2 (ITS2) des ribosomalen Genrepeats ist ein zunehmend wichtiger phylogenetischer Marker, dessen RNA-Sekundärstruktur innerhalb vieler eukaryontischer Organismen konserviert ist.
Selig, Christian
core   +2 more sources

rDNA-ITS2 characterization of Trichogramma species (Hymenoptera: Trichogrammatidae) in Turkey [PDF]

open access: yesEgyptian Journal of Biological Pest Control, 2022
Background ITS2 sequences can be used in systematic studies and proved to give reliable results in the distinguishing of Trichogramma species (Hymenoptera: Trichogrammatidae).
Fahriye Sümer Ercan   +2 more
doaj   +2 more sources

GC heterogeneity reveals sequence-structures evolution of angiosperm ITS2

open access: yesBMC Plant Biology, 2023
   We sampled plant lineages from the NCBI database, for which ribosomal ITS/ITS2 sequences are available from closely related species. We focused on lineages that presented DNA barcodes, as they generally have adequate inter- and intraspecific sampling ...
wei zhang (6110123)
core   +4 more sources

Combining the 5.8S and ITS2 to improve classification of fungi [PDF]

open access: yesMethods in Ecology and Evolution, 2019
1. The internal transcribed spacer (ITS) is used often in DNA metabarcoding of fungi. One disadvantage of its high variability may be a failure to classify operational taxonomic units (OTUs) when no similar reference sequence exists.
Bourne, Elizabeth   +9 more
core   +2 more sources

Evaluation of ITS2 for intraspecific identification of Paeonia lactiflora cultivars

open access: yesBiotechnology Reports, 2017
Herbaceous peony (Paeonia lactiflora Pall.) is an important ornamental and medicinal plant. DNA barcodes can reveal species identity via the nucleotide diversity of short DNA segments.
Chengrong Gao   +6 more
core   +4 more sources

Extending the ITS2-workbench with DNA barcoding capabilities

open access: yes, 2015
Background The internal transcribed spacer 2 (ITS2) is a well-established marker for DNA barcoding, especially for plants and fungi. Yet so far, no specific reference database exists dedicated to this purpose.
Förster, Frank   +11 more
core   +3 more sources

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