Results 1 to 10 of about 2,336 (168)

Effectiveness of Single Nucleotide Polymorphism Markers in Genotyping Germplasm Collections of Coffea canephora Using KASP Assay [PDF]

Frontiers in Plant Science, 2021
Accurate genotype identification is imperative for effective use of Coffea canephora L. germplasm to breed new varieties with tolerance or resistance to biotic and abiotic stresses (including moisture stress and pest and disease stresses such as coffee ...
Abraham Akpertey, Francis K. Padi, Lyndel Meinhardt, Dapeng Zhang   +3 more
doaj   +5 more sources

Validating DNA Polymorphisms Using KASP Assay in Prairie Cordgrass (Spartina pectinata Link) Populations in the U.S. [PDF]

Frontiers in Plant Science, 2016
Single nucleotide polymorphisms (SNPs) are one of the most abundant DNA variants found in plant genomes and are highly efficient when comparing genome and transcriptome sequences.
Hannah eGraves, A. Lane Rayburn, Jose Luis Gonzalez-Hernandez, Gyoungju eNah, Do-Soon eKim, D.K. eLee   +5 more
doaj   +5 more sources

Development and validation of a simple, cost-effective competitive allele-specific PCR assay for largescale screening and detection of FecB mutation in sheep. [PDF]

PLoS ONE
The Booroola fecundity (FecB) gene, a mutation in the bone morphogenetic protein receptor-1B (BMPR1B), is known to increase ovulation rate and litter size in sheep. Efficient and accurate, large-scale detection of this single nucleotide polymorphism (SNP)
Kathiravan Periasamy, Rudolf Pichler, Saravanan Ramasamy, Rajesh Kumar Somasundaram, Muladno Basar, Atanaska Teneva, Amadou Traore, Arnaud S R Tapsoba, Mohammed O Faruque, Seyed Abbas Rafat, Tanveer Hussain   +10 more
doaj   +2 more sources

Rapid Resistance Detection of Amaranthus retroflexus to Fomesafen via Kompetitive Allele-Specific PCR (KASP) [PDF]

Plants
Amaranthus retroflexus is a highly invasive annual broadleaf weed in soybean fields, significantly reducing soybean yield and quality. Diphenyl ether herbicides, particularly fomesafen, are extensively applied to control A. retroflexus.
Zhanzhan Zhang, Yaxin Ban, Jianguo Wei, Qun Wu, Liyao Dong, Zhike Feng   +5 more
doaj   +2 more sources

Two fingerprinting sets for Humulus lupulus based on KASP and microsatellite markers

PLoS ONE, 2022
Verification of clonal identity of hop (Humulus lupulus L.) cultivars within breeding programs and germplasm collections is vital to conserving genetic resources.
Mandie Driskill, Katie Pardee, Kim E. Hummer, Jason D. Zurn, Keenan Amundsen, Annette Wiles, Claudia Wiedow, Josef Patzak, John A. Henning, Nahla V. Bassil   +9 more
doaj   +2 more sources

Automating high-throughput screening for anthracnose resistance in common bean using allele specific PCR

Plant Methods, 2023
Background Common beans (Phaseolus vulgaris L.) provide important protein and calories globally. Anthracnose (Colletotrichum lindemuthianum (Sacc. & Magnus) Briosi & Cavara, 1889) is a major disease in common bean and causes significant yield losses in ...
Marysia Zaleski-Cox, Phillip N. Miklas, Alvaro Soler-Garzón, Valerio Hoyos-Villegas   +3 more
doaj   +1 more source

Development and validation of functional kompetitive allele-specific PCR markers for herbicide resistance in Brassica napus

Frontiers in Plant Science, 2023
Effective weed control in the field is essential for maintaining favorable growing conditions and rapeseed yields. Sulfonylurea herbicides are one kind of most widely used herbicides worldwide, which control weeds by inhibiting acetolactate synthase (ALS)
Jianghua Shi, Huasheng Yu, Ying Fu, Tanliu Wang, Yaofeng Zhang, Jixiang Huang, Sujuan Li, Tao Zheng, Xiyuan Ni, Jianyi Zhao   +9 more
doaj   +1 more source

Development of Kompetitive Allele Specific PCR markers for identification of persimmon varieties using genotyping-by-sequencing

Electronic Journal of Biotechnology, 2021
Background: Persimmon (Diospyros kaki Thunb.) is the most widely cultivated species of the genus Diospyros. In this study, genetic diversity and variations in persimmon genotypes were investigated using single nucleotide polymorphism (SNP) markers ...
Kyeong Bok Ma, Sang-Jin Yang, Ye-Seul Jo, Sam Seok Kang, Moon Nam   +4 more
doaj   +1 more source

Kompetitive Allele Specific PCR (KASP) Markers for Potato: An Effective Tool for Increased Genetic Gains

Agronomy, 2021
Potato virus Y (PVY) and Phytophthora infestans (Mont.) de Bary that causes potato late blight (LB), pose serious constraints to cultivated potatoes due to significant yield reduction, and phenotyping for resistance remains challenging.
Moctar Kante, Hannele Lindqvist-Kreuze, Leticia Portal, Maria David, Manuel Gastelo   +4 more
doaj   +1 more source

KASP Genotyping as a Molecular Tool for Diagnosis of Cassava-Colonizing Bemisia tabaci

Insects, 2020
Bemisia tabaci is a cryptic species complex that requires the use of molecular tools for identification. The most widely used approach for achieving this is the partial sequencing of the mitochondrial DNA cytochrome oxidase I gene (COI).
Everlyne N. Wosula, Wenbo Chen, Massoud Amour, Zhangjun Fei, James P. Legg   +4 more
doaj   +1 more source