Zipper plot : visualizing transcriptional activity of genomic regions [PDF]
Background: Reconstructing transcript models from RNA-sequencing (RNA-seq) data and establishing these as independent transcriptional units can be a challenging task.
Avila Cobos, Francisco+7 more
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The Landscape of Long Non-Coding RNA Dysregulation and Clinical Relevance in Muscle Invasive Bladder Urothelial Carcinoma. [PDF]
Bladder cancer is one of the most common cancers in the United States, but few advancements in treatment options have occurred in the past few decades.
Chang, Eric Y+7 more
core +1 more source
Identification and function of long non-coding RNAs
It is now clear that eukaryotic cells produce many thousands of non-coding RNAs. The least well-studied of these are longer than 200 nt and are known as lncRNAs (long non-coding RNAs). These loci are of particular interest as their biological relevance remains uncertain.
Robert S. Young, Chris P. Ponting
openaire +3 more sources
Novel long non-protein coding RNAs involved in Arabidopsis differentiation and stress responses [PDF]
Besma Ben Amor+12 more
openalex +1 more source
HDAC3 inhibition mitigates acute kidney injury by alleviating RIPK1-mediated programmed necrosis
Acute kidney injury (AKI) refers to clinical syndromes culminating in rapidly reduced renal function associated with inflammation and the demise of renal tubular epithelial cells.
Manman Xie+11 more
doaj +1 more source
Prediction of plant lncRNA by ensemble machine learning classifiers
Background In plants, long non-protein coding RNAs are believed to have essential roles in development and stress responses. However, relative to advances on discerning biological roles for long non-protein coding RNAs in animal systems, this RNA class ...
Caitlin M. A. Simopoulos+2 more
doaj +1 more source
Cascade transcription of mRNA-type long non-coding RNAs (mlonRNAs) and local chromatin remodeling [PDF]
Kouji Hirota, Kunihiro Ohta
openalex +1 more source
Female-biased expression of long non-coding RNAs in domains that escape X-inactivation in mouse [PDF]
Björn Reinius+9 more
openalex +1 more source
Long non-coding RNA HOTAIR reprograms chromatin state to promote cancer metastasis [PDF]
Rajnish A. Gupta+17 more
openalex +1 more source
RNA-based liquid biopsies for better clinical management of Barrett’s esophagus and esophageal adenocarcinoma [PDF]
In the past decades the incidence of esophageal adenocarcinoma (EAC) has increased dramatically in most Western populations. Due to the lack of symptoms EAC is often detected in a late stage, contributing to a poor 5-year survival rate.
De Preter, Katleen+6 more
core