Identifying Interaction Sites in "Recalcitrant" Proteins: Predicted Protein and Rna Binding Sites in Rev Proteins of Hiv-1 and Eiav Agree with Experimental Data [PDF]
Protein-protein and protein nucleic acid interactions are vitally important for a wide range of biological processes, including regulation of gene expression, protein synthesis, and replication and assembly of many viruses. We have developed machine learning approaches for predicting which amino acids of a protein participate in its interactions with ...
arxiv
Binding interactions of boronic acid derivatives viz. 2-Methylphenylboronic acid (B1) and 3-Methoxyphenylboronic acid (B2) with mono saccharides (arabinose, fructose and galactose) and disaccharides (sucrose, lactose and maltose) in aqueous condition at ...
Raveendra Melavanki+4 more
doaj
Accurate and efficient protein embedding using multi-teacher distillation learning [PDF]
Motivation: Protein embedding, which represents proteins as numerical vectors, is a crucial step in various learning-based protein annotation/classification problems, including gene ontology prediction, protein-protein interaction prediction, and protein structure prediction.
arxiv
Escherichia coli signal peptides direct inefficient secretion of an outer membrane protein (OmpA) and periplasmic proteins (maltose-binding protein, ribose-binding protein, and alkaline phosphatase) in Bacillus subtilis [PDF]
David N. Collier
openalex +1 more source
Expression of Escherichia coli SecB in Bacillus subtilis facilitates secretion of the SecB-dependent maltose-binding protein of E. coli [PDF]
David N. Collier
openalex +1 more source
Prediction of the structural similarity between spermidine/putrescine‐binding protein and maltose‐binding protein [PDF]
Yo Matsuo, Ken Nishikawa
openalex +1 more source
Summary: Polyphosphate exhibits a unique post-translational modification-like function, known as histidine polyphosphate modification (HPM), marked by a robust non-covalent interaction with histidine repeat proteins.
Kirsten Lehotsky+2 more
doaj
Two Modes of Ligand Binding in Maltose-binding Protein ofEscherichia coli [PDF]
Jason A. Hall+2 more
openalex +1 more source
The Detergent-Soluble Maltose Transporter Is Activated by Maltose Binding Protein and Verapamil [PDF]
Ronit Reich‐Slotky+3 more
openalex +1 more source