Results 11 to 20 of about 72,487 (242)

Mathematical modeling of histone modifications reveals the formation mechanism and function of bivalent chromatin

open access: yesiScience, 2021
Summary: Bivalent chromatin is characterized by occupation of both activating and repressive histone modifications. Here, we develop a mathematical model that involves antagonistic histone modifications H3K4me3 and H3K27me3 to capture the key features of
Wei Zhao   +4 more
doaj   +3 more sources

Mathematical modeling identifies LAG3 and HAVCR2 as biomarkers of T cell exhaustion in melanoma

open access: yesiScience, 2023
Summary: Cytotoxic T lymphocytes (CTLs) control tumors via lysis of antigen-presenting targets or through secretion of cytokines such as interferon-γ (IFNG), which inhibit tumor cell proliferation.
Richard J. Beck   +4 more
doaj   +3 more sources

Sex differences in solute and water handling in the human kidney: Modeling and functional implications

open access: yesiScience, 2021
Summary: The kidneys maintain homeostasis by controlling the amount of water and electrolytes in the blood. That function is accomplished by the nephrons, which transform glomerular filtrate into urine by a transport process mediated by membrane ...
Rui Hu   +2 more
doaj   +3 more sources

Blood Flow Contributions to Cancer Metastasis

open access: yesiScience, 2020
Summary: The distribution patterns of cancer metastasis depend on a sequence of steps involving adhesion molecules and on mechanical and geometrical effects related to blood circulation, but how much each of these two aspects contributes to the ...
Francesc Font-Clos   +2 more
doaj   +3 more sources

Neural oscillations and speech processing at birth

open access: yesiScience, 2023
Summary: Are neural oscillations biologically endowed building blocks of the neural architecture for speech processing from birth, or do they require experience to emerge?
Maria Clemencia Ortiz-Barajas   +2 more
doaj   +1 more source

MRI-based deep learning model predicts distant metastasis and chemotherapy benefit in stage II nasopharyngeal carcinoma

open access: yesiScience, 2023
Summary: Chemotherapy remains controversial for stage II nasopharyngeal carcinoma because of its considerable prognostic heterogeneity. We aimed to develop an MRI-based deep learning model for predicting distant metastasis and assessing chemotherapy ...
Yu-Jun Hu   +15 more
doaj   +1 more source

MYC dosage compensation is mediated by miRNA-transcription factor interactions in aneuploid cancer

open access: yesiScience, 2021
Summary: We hypothesize that dosage compensation of critical genes arises from systems-level properties for cancer cells to withstand the negative effects of aneuploidy.
ManSai Acón   +16 more
doaj   +1 more source

Identifying stem cell numbers and functional heterogeneities during postembryonic organ growth

open access: yesiScience, 2022
Summary: Uncovering the number of stem cells necessary for organ growth has been challenging in vertebrate systems. Here, we developed a mathematical model characterizing stem cells in the fish gill, an organ displaying non-exhaustive growth. We employ a
Diana-Patricia Danciu   +3 more
doaj   +1 more source

Reply to determining structural identifiability of parameter learning machines [PDF]

open access: yes, 2016
The paper Ran and Hu (2014, Neurocomputing) examines identifiability and parameter redundancy in classes of models used in machine learning. This note discusses the results on global identifiability and also clarifies that the paper's results on ...
Cole, Diana J.
core   +1 more source

A novel perturbation based compression complexity measure for networks

open access: yesHeliyon, 2019
Measuring complexity of brain networks in the form of integrated information is a leading approach towards building a fundamental theory of consciousness.
Mohit Virmani, Nithin Nagaraj
doaj   +1 more source

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