Results 1 to 10 of about 603,627 (298)

GPU IMPLEMENTATION OF ATOMIC FLUID MD SIMULATION.

open access: yesTASK Quarterly, 2022
A computer simulation of an atomic fluid on a GPU was implemented using the CUDA architecture. It was shown that the programming model for efficient numerical computing applications was changing with the development of the CUDA architecture.
ALEKSANDER DAWID
doaj   +2 more sources

5-(2-Carboxyethenyl)-Isatin Derivatives as Anticancer Agents: QSAR, Molecular Docking and Molecular Dynamic Simulation Analysis [PDF]

open access: yesJournal of Sciences, Islamic Republic of Iran, 2021
Isatin and its analogues have been shown anticancer activity against various cancer cell lines via restrainting cancer cell proliferation and tumor growth.
Leila Emami   +6 more
doaj   +1 more source

Synthesis of N-phenethyl-p-methoxycinnamamide and N-morpholinyl-p-methoxycinnamamide, In Vitro and In Silico Study as α-Glucosidase Inhibitor

open access: yesIndonesian Journal of Chemistry, 2022
Aromatic ginger (Kaempferia galanga L.) is one of the natural sources containing ethyl-p-methoxycinnamate, which is known to have beneficial activity, especially as an α-glucosidase inhibitor.
Herlina Rasyid   +8 more
doaj   +1 more source

Molecular interaction of inhibitors with human brain butyrylcholinesterase

open access: yesEXCLI Journal : Experimental and Clinical Sciences, 2021
Alzheimer’s disease is a topic of deep research interest across the global scientific community. Butyrylcholinesterase (BuChE) is an important enzyme, and an interesting anti-Alzheimer’s target.
Shazi Shakil
doaj   +1 more source

Nilotinib repositioning in cancers implying Cx43 tumorigenesis process [PDF]

open access: yesWorld Cancer Research Journal, 2021
Objective: Among the 21 human connexins, the ubiquitous protein Cx43 is the most abundant in many cell types. It is also associated with the tumorigenic process and the formation of metastases in several types of common cancers such as breast and ...
S. Berrahoui   +4 more
doaj   +1 more source

GPU-Accelerated Algorithm Optimization for Molecular Dynamics Simulation of Crystalline Silicon [PDF]

open access: yesJisuanji gongcheng, 2023
Molecular Dynamics(MD) is one of the main methods used to study the thermodynamic properties of silicon nano-films;however, these studies have problems such as processing massive amounts of data, computational intensity, and complex interatomic ...
LIN Lin, ZHU Aiqi, ZHAO Mingcan, ZHANG Shuai, YE Yanhao, XU Ji, HAN Lin, ZHAO Rongcai, HOU Chaofeng
doaj   +1 more source

Large scale MD simulations of nucleation [PDF]

open access: yesAIP Conference Proceedings, 2013
We present preliminary results from large scale molecular dynamics (MD) simulations of homogenous vapor to liquid nucleation. The simulations contain between one and eight billion Lennard-Jones atoms and were run for up to 56 million time-steps. The large particle numbers (over 104 times larger than previous simulations, see e.g.
Diemand Juerg   +3 more
openaire   +3 more sources

CHAPERONg: A tool for automated GROMACS-based molecular dynamics simulations and trajectory analyses

open access: yesComputational and Structural Biotechnology Journal, 2023
Molecular dynamics (MD) simulation is a powerful computational tool used in biomolecular studies to investigate the dynamics, energetics, and interactions of a wide range of biological systems at the atomic level.
Abeeb Abiodun Yekeen   +4 more
doaj   +1 more source

In silico approach to understand epigenetics of POTEE in ovarian cancer

open access: yesJournal of Integrative Bioinformatics, 2021
Ovarian cancer is the third leading cause of cancer-related deaths in India. Epigenetics mechanisms seemingly plays an important role in ovarian cancer.
Qazi Sahar, Raza Khalid
doaj   +1 more source

Effect of HFO Refrigerants on Lubrication Characteristics (Part 2)

open access: yesTribology Online, 2023
Following the previous paper focusing on tribological properties of hydrofluoroolefin (HFO) refrigerant, the adsorption behavior of refrigerants on the nascent iron surface was investigated experimentally and the adsorption structure, adsorption energy ...
Yuji Shitara   +2 more
doaj   +1 more source

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