Results 131 to 140 of about 24,742 (210)

Bridging the Cultivation Gap in Plant Microbiomes: A Comparative Study of Aerial Root Mucilage Microbiome Characterization by Conventional Isolation, Prospector High-Throughput Cultivation, and Molecular Profiling. [PDF]

Microbiologyopen
De la Vega-Camarillo E, Quattrone AC, Okumoto S, Rajan N, Hernández-Rodríguez C, Bernal JS, Antony-Babu S.   +6 more
europepmc   +1 more source

Combining Time-Stamped Insect Sampling With eDNA-Metabarcoding of Guano to Reconstruct Community Interactions. [PDF]

Ecol Evol
Hartke TR, Wittenhorst M, Koch M, Scherber C, Twietmeyer S, Bourlat SJ, Böhme M, Kirse A.   +7 more
europepmc   +1 more source

A Field-Deployable eDNA Metabarcoding Workflow Including De Novo Reference Assembly for Characterising Understudied Biodiversity Hotspots. [PDF]

Mol Ecol Resour
Erens J, Heine C, Lötters S, Krehenwinkel H, Crawford AJ, Rueda-Solano LA, Plewnia A.   +6 more
europepmc   +1 more source

Unveiling Protist Composition and Diversity Patterns With eDNA Metabarcoding: Comparing Short- and Long-Read Approaches. [PDF]

Ecol Evol
Skouroliakou DI, Dupont DWE, Vandenboer Y, D'Hont S, Sabbe K, Schön I.   +5 more
europepmc   +1 more source

Correction to "Unveiling Protist Composition and Diversity Patterns With eDNA Metabarcoding: Comparing Short- and Long-Read Approaches". [PDF]

Ecol Evol
europepmc   +1 more source

Molecular detections of 14 amphidomatacean species (Dinophyceae) and their temperature-associated distribution in subarctic waters off eastern Hokkaido, Japan. [PDF]

J Plankton Res
Nakano K, Kuwata K, Shimonaka T, Tillmann U, Kodama T, Takahashi K, Iwataki M.   +6 more
europepmc   +1 more source

Clustering metabarcoding data: a model-based approach

Metabarcoding is a highly efficient molecular technique that provides large species occurrence datasets. However, it presents a major limitation as only presence/absence of a species, not abundance, is detectable.
Ventrucci Massimo, Page Garritt, Franco-Villoria Maria, Laini Alex, Ferrari Luisa   +4 more
core  

Accounting for Intra- and Intergenomic Sequence Variation in Reference Barcodes Improves eDNA Metabarcoding Biodiversity Assessment. [PDF]

Mol Ecol Resour
McCartin LJ, Vohsen SA, Wood AL, Horowitz J, Orozco-Juarbe JJ, Pittoors N, Morrissey D, Vaga CF, Hansel CM, Collins AG, Quattrini AM, Herrera S.   +11 more
europepmc   +1 more source

DNA source and primer choice affect the reliability of metabarcoding for nematode community profiling in agricultural soils. [PDF]

PLoS One
Akanwari J, Islam MR, Liang P, Sultana T.   +3 more
europepmc   +1 more source

Trait-Based Biomonitoring Using eDNA Metabarcoding to Assess Anthropogenic Disturbances on Freshwater Fish Communities. [PDF]

Mol Ecol Resour
Morissette O, Côté G, Couillard MA, Pouliot R, Bernatchez L.   +4 more
europepmc   +1 more source