Development of a multigenic metabarcoding protocol for deciphering the diversity of plant-associated Archaea. [144] [PDF]
, 2018 Soil and plant microbiota are playing an eminent role in shaping both natural ecosystems and agricultural production systems. It is now widely admitted that bacterial communities show a great diversity in both the plant rhizosphere and the plant ...
Alonso, Pascal +5 more
core
Recolonizing gray wolves increase parasite infection risk in their prey [PDF]
, 2018 The recent recolonization of Central Europe by the European gray wolf (Canis lupus) provides an opportunity to study the dynamics of parasite transmission for cases when a definitive host returns after a phase of local extinction. We investigated whether
Franz, Mathias +6 more
core +1 more source
A new versatile primer set targeting a short fragment of the mitochondrial COI region for metabarcoding metazoan diversity: application for characterizing coral reef fish gut contents [PDF]
, 2013 Matthieu Leray +7 more
openalex +1 more source
Metabarcoding arthropods in agroecosystems in Southern Ontario, Canada
Biodiversity Data JournalMetabarcoding can generate large numbers of georeferenced occurrence data from bulk samples at low cost. Its integration into the practice of agricultural invertebrate biomonitoring currently lacks both standard methods and example datasets that allow the identification of potential challenges and uncertainties.
Dirk Steinke +10 more
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PLoS ONEWith the decline of bee populations worldwide, studies determining current wild bee distributions and diversity are increasingly important. Wild bee identification is often completed by experienced taxonomists or by genetic analysis.
Cassandra D Smith +9 more
doaj +1 more source
Rank‐based characterization of pollen assemblages collected by honey bees using a multi‐locus metabarcoding approach [PDF]
, 2015 Rodney T. Richardson +5 more
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Metabarcoding and eDNA for insect conservation
Environmental DNA (eDNA) samples and metabarcoding studies have emerged as transformative sampling methods and techniques with potential in the field of insect conservation. eDNA refers to genetic material shed by organisms into their environment. By extracting and sequencing this DNA, it is possible to detect the presence of target species without the
Bierman, Anandi, Lloyd, Melissa
openaire +2 more sources
Metabarcoding analysis of oral microbiome during pregnancy
Frontiers in Cellular and Infection MicrobiologyPregnancy is a dynamic physiological process involving significant hormonal, immune, and metabolic changes to support fetal growth and development. This study investigates the changes in salivary microbiome and biochemical markers from the second to the third trimester of pregnancy.
Fatiha M. Benslimane +9 more
openaire +5 more sources
PLoS ONE, 2019 The use of environmental DNA (eDNA) methods for community analysis has recently been developed. High-throughput parallel DNA sequencing (HTS), called eDNA metabarcoding, has been increasingly used in eDNA studies to examine multiple species.
Kazuya Fujii +5 more
doaj +1 more source
Can Theory Improve the Scope of Quantitative Metazoan Metabarcoding? [PDF]
, 2015 John P. Wares, Paula Pappalardo
openalex +1 more source