Results 191 to 200 of about 537,462 (223)

Metagenome-assembled genomes enhance bacterial read decontamination and variant calling in oral samples. [PDF]

iScience
An Z, Cha JH, Lee KH, Lee I.
europepmc   +1 more source

gcMeta 2025: a global repository of metagenome-assembled genomes enabling cross-ecosystem microbial discovery and function research. [PDF]

Nucleic Acids Res
Sun Y, Chen Q, Fan G, Sun Q, Zhou Q, Zhang J, Nie J, Ma J, Wu L.   +8 more
europepmc   +1 more source

Integration of metagenome-assembled genomes with clinical isolates expands the genomic landscape of gut-associated Klebsiella pneumoniae. [PDF]

Nat Commun
Gupta S, Almeida A.
europepmc   +1 more source

Metagenome-assembled genomes from the gut microbiome of spontaneous diabetic macaques provide insights into microbes associated with type 2 diabetes mellitus. [PDF]

BMC Microbiol
Xie Y, Wang R, Liu X, Du Q, Mo S, Liu Q, Yang G, Fan Z, Li J.   +8 more
europepmc   +1 more source

Metagenome-assembled genomes from a population-based cohort uncover novel gut species and within-species diversity, revealing prevalent disease associations. [PDF]

mSystems
Pantiukh K, Krigul KL, Aasmets O, Org E.
europepmc   +1 more source

Insights into antibiotic resistomes from metagenome-assembled genomes and gene catalogs of soil microbiota across environments. [PDF]

PeerJ
Han X, Liu H, Bai X, Li D, Wang T, Zhong H, Yao Y, Sun J.   +7 more
europepmc   +1 more source

Metagenome-assembled genomes reveal microbial signatures and metabolic pathways linked to coronary artery disease. [PDF]

mSystems
Lee S, Raza S, Lee E-J, Chang Y, Ryu S, Kim H-L, Kang S-H, Kim H-N.   +7 more
europepmc   +1 more source

Shotgun metagenomic profiling of bacterial microbiomes, metagenome-assembled genomes and antimicrobial resistance in respiratory and blood samples from Gambian children with pneumonia

Khan D, Espinoza JL, Tientcheu P, Otchere ID, Mohammed NI, Worwui A, Nicol MP, Kwambana-Adams B, Antonio M, Dupont CL.   +9 more
europepmc   +1 more source

Unitig Level Assembly Graph Based Metagenome-Assembled Genome Refiner (UGMAGrefiner): A Tool to Increase Completeness and Resolution of Metagenome-Assembled Genomes

Computational and Structural Biotechnology Journal, 2023
De novo assembly of next generation metagenomic reads is widely used to provide taxonomic and functional information of genomes in a microbial community. As strains are functionally specific, recovery of strain-resolved genomes is important but still a challenge.
Liping Zhao, Menghui Zhang
exaly   +4 more sources

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Metagenomic Assembly: Reconstructing Genomes from Metagenomes

2021
Assembly of metagenomic sequence data into microbial genomes is of critical importance for disentangling community complexity and unraveling the functional capacity of microorganisms. The rapid development of sequencing technology and novel assembly algorithms have made it possible to reliably reconstruct hundreds to thousands of microbial genomes from
Wang Z., Liang J. -L., Huang L. -N., Mengoni A., Shu W. -S.   +4 more
openaire   +3 more sources