Results 121 to 130 of about 138,246 (299)

Gut Microbiota of Gray Snub‐Nosed Monkeys: Adaptation to Seasonal Variations Through Energy Compensation and Thermogenesis

Integrative Zoology, EarlyView.
Based on metagenome‐assembled genomes (MAGs), the gut microbiota of the gray snub‐nosed monkeys recovered 1229 non‐redundant MAGs. The gut microbiota showed an enhanced capacity to produce energy substrates with increased conversion activity of these substrates during winter.
Yue Sun, Mingyi Zhang, Xiaochen Wang, Xiaolong Huang, Yanze Yu, Huijuan Pan, Haibo Li, Lei Shi, Wei Yang, Chen Zhang, Bo Ding, Xun Liu, Jianfeng Li, Changjiang Qian, Boxing Cheng, Chao Zhang, Jingcheng Ran, Ming Li   +17 more
wiley   +1 more source

Metagenome Analysis Reveals Changes in Gut Microbial Antibiotic Resistance Genes and Virulence Factors in Reintroduced Giant Pandas

Microorganisms
Antibiotic resistance has emerged as a critical global public health challenge. In this study, we employed metagenomic sequencing to analyze fecal samples from giant pandas (Ailuropoda melanoleuca) across three distinct stages—semi-wild, released, and ...
Wanju Feng, Chenyi Gao, Xinyuan Cui, Bing Yang, Ke He, Qiuyu Huang, Xinru Yang, Kaizhi Wen, Jiadong Xie, Zhisong Yang, Lifeng Zhu   +10 more
doaj   +1 more source

Multi‐Omics Analysis Reveals Coordinated Adaptations in Genes, Metabolism, and Gut Microbiota Underpinning Herbivory in Lordiphosa Flies

Integrative Zoology, EarlyView.
Multi‐omics analysis reveals that herbivorous adaptation in Lordiphosa flies arises from coordinated interactions across the genome, transcriptome, and gut microbiota: genomic expansions of detoxification (e.g., cytochrome P450s) and carbohydrate metabolism gene families, transcriptomic upregulation of energy pathways like lipid oxidation and ...
Run Guo, Jianjun Gao, Caixian Zhang, Zhiheng Chang, Yanbo Sun   +4 more
wiley   +1 more source

Enhanced Natural Attenuation of Gasoline Contaminants in Groundwater: Applications and Challenges of Nitrate-Stimulating Substances

Microorganisms
Nitrate is a promising enhanced natural attenuation (ENA) material that enhances the microbial degradation of petroleum hydrocarbons by acting as an electron acceptor and nitrogen source.
Zhuo Ning, Jiaqing Liang, Jinjin Ti, Min Zhang, Chao Cai   +4 more
doaj   +1 more source

Snake Gut Microbiota as a Source of Anti‐Inflammatory Probiotics: Isolation and Functional Characterization of Two Novel Strains

Integrative Zoology, EarlyView.
This study assessed the probiotic potential of intestinal microbiomes from five snake species using metagenomics and in vitro isolation, identifying two promising strains (Lactobacillus johnsonii DA0116 and Limosilactobacillus reuteri DA0218) through comprehensive screening.
Xuena Kang, Lan Hu, Jiarong Song, Zhenjie Zhang, Yi Li, Qingqing Zhang, Cuiling Luo, Yu Pang, Peng Guo, Bisong Yue, Ping Li, Zhenxin Fan   +11 more
wiley   +1 more source

Metagenome summary statistics.

, 2012
Metagenome summary statistics.
Terry J. Gentry (156799), Mark T. Holtzapple (156792), Stephanie A. Malfatti (124718), Emily B. Hollister (156772), Heather H. Wilkinson (156780), Andrea K. Forrest (156777), Daniel J. Ebbole (156786), Susannah G. Tringe (43680)   +7 more
core   +1 more source

Seasonal Dynamics of Community and Function of Gut Microbiome in Taihangshan Macaque (Macaca mulatta tcheliensis): Inferred From Metagenomic Data

Integrative Zoology, EarlyView.
A total of 435 non‐redundant metagenome‐assembled genomes (MAGs) were obtained from fecal samples of Taihangshan macaque across all four seasons. The alpha diversity of the gut microbiome in spring and winter was significantly higher than in summer and autumn. Furthermore, marked differences were detected in functional pathways and carbohydrate enzymes
Yanyan Zhou, Qi Shao, Chunbo Liu, Jundong Tian, Xiaowen Guan, Xi Zhang, Jiqi Lu   +6 more
wiley   +1 more source

Macro- and metabolome-based characterization between gut microbiota and metabolites in patients with colorectal adenomas

Frontiers in Microbiology
ObjectiveThe gut microbiota has been recognized as a significant regulator in the development and progression of colorectal adenoma (CRA). However, few studies have investigated the presence and association of resident microbial species and metabolites ...
Guo Zhili, Liu Jie, Liu Jie, Yin Peihao
doaj   +1 more source

Comparative metagenomics using pan-metagenomic graphs

Abstract Identifying microbial genomic factors underlying human phenotypes is a key goal of microbiome research. Sequence graphs are a highly effective tool for genome comparisons because they enable high-resolution de novo analyses that capture and contextualize complex genomic variation.
Izaak Coleman, Natalya Mametyarova, Andrey Zaznaev, Peiwen Cai, Lisa Yu, Yoli Meydan, Aviya Litman, Ayushi Sharma, Lily He, Amanda Simkhovich, Dwayne Seeram, Heekuk Park, Yael R. Nobel, Aya Brown Kav, Itsik Pe’er, Anne-Catrin Uhlemann, Tal Korem   +16 more
openaire   +2 more sources

TerraGenome: a consortium for the sequencing of a soil metagenome

, 2009
Vogel and colleagues invite the microbiology community to participate in an ambitious and extraordinary sequencing project to uncover the soil ...
Timothy M. Vogel, Vogel, Timothy M., Jansson, J. K., Jan Dirk van Elsas, Jansson, Janet K., Nalin, Renaud, Jansson, Janet, K., Penny R. Hirsch, James M. Tiedje, Mark J. Bailey, Renaud Nalin, Vogel, T. M., Simonet, P., Philippot, L., Pascal Simonet, van Elsas, Jan Dirk, Hirsch, P. R., Vogel, Timothy M, Hirsch, Penny, R., Van Elsas, J. D., Hirsch, Penny R., Tiedje, James, M., Laurent Philippot, Bailey, Mark J., Philippot, Laurent, van Elsas, Jan, Dirk, Simonet, Pascal, Nalin, R., Bailey, M. J., Tiedje, James M., Tiedje, J. M., Janet K. Jansson, Bailey, Mark, J.   +32 more
core   +1 more source