Results 61 to 70 of about 30,876 (211)

Salinity-driven niche partitioning of aquatic viruses in one of Europe’s largest estuaries

open access: yesApplied and Environmental Microbiology
Viruses are a vital part of the aquatic food web and hold a profound role in carbon and energy cycling at different trophic levels. Despite the rising interest in aquatic viruses, very few studies were conducted in estuaries, where freshwater and marine ...
Julia Gołębiowska   +3 more
doaj   +1 more source

Principal component analysis of 26 metagenomes based on RATC genes.

open access: yes, 2012
Information regarding resistance to antibiotic and toxic compounds (RATC) was used to perform a principal component analysis of 26 publicly available metagenomes.
Lisa M. Durso (122485)   +2 more
core   +1 more source

Translational metagenomics [PDF]

open access: yesJournal of Translational Medicine, 2021
Selvasankar Murugesan   +1 more
openaire   +3 more sources

Fecal microbiota transplantation in patients recovering from severe pneumonia: an exploratory single-arm pilot study

open access: yesFrontiers in Cellular and Infection Microbiology
ObjectiveTo explore the potential association of fecal microbiota transplantation (FMT) with gastrointestinal symptoms and intestinal dysbiosis in patients recovering from severe pneumonia.MethodsA total of 15 adult patients with confirmed severe ...
Fang Zhou   +15 more
doaj   +1 more source

The Distribution of Tryptophan-Dependent Indole-3-Acetic Acid Synthesis Pathways in Bacteria Unraveled by Large-Scale Genomic Analysis

open access: yesMolecules, 2019
Bacterial indole-3-acetic acid (IAA), an effector molecule in microbial physiology, plays an important role in plant growth-promotion. Here, we comprehensively analyzed about 7282 prokaryotic genomes representing diverse bacterial phyla, combined with ...
Pengfan Zhang   +6 more
doaj   +1 more source

CRAM Artificial Metagenomes

open access: yes, 2012
Several artificial metagenomes created to benchmark a metagenome annotation pipeline. Combined Tables.zip contains matrices with the number of reads belonging to each identified subsystem across all samples.
Austin Davis-Richardson (96921)
core   +1 more source

WS/DGAT homolog sequences from metagenomes of Antarctic and Subantarctic sediments.

open access: yes, 2023
(A) Relative abundance of WS/DGAT homolog sequences in sediment metagenomes. The estimated copies of sequences containing the PF03007 domain (unassembled and assembled metagenomes) was normalized by dividing by the estimated copies of 12 selected single ...
Hugo C. Gramajo (16557888)   +9 more
core   +1 more source

Spatial Structuring of Cellulase Gene Abundance and Activity in Soil

open access: yesFrontiers in Environmental Science, 2018
Microbial mechanisms controlling cellulose degradation in soil habitats remains a critical knowledge gap in understanding and modeling terrestrial carbon-cycling.
Jinlyung Choi   +8 more
doaj   +1 more source

Phylogenomic trees of MAGs isolated from lichen metagenomes

open access: yes, 2023
Supplementary files associated with Tagirdzhanova et al. 2023. A global survey of lichen symbionts from metagenomes Maximum likelihood phylogenetic trees of the MAGs isolated from lichen metagenomes.  Includes three files:  1.
Gulnara Tagirdzhanova (12530167)
core   +1 more source

Sequence annotation statistics for the MC and CT metagenomes.

open access: yes, 2013
Sequence annotation statistics for the MC and CT metagenomes.
Shulei Sun (354595)   +4 more
core   +1 more source

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