Abstract Objectives Pediatric acute pancreatitis (AP), Crohn's disease (CD), and irritable bowel syndrome (IBS) are associated with gut dysbiosis, but differences and similarities between conditions are unknown. We hypothesized that gut microbial ecology would differ across these disorders. Methods Stool was collected from 120 subjects (AP [n = 30], CD
Neha R. Santucci +9 more
wiley +1 more source
Optimization of Metagenomic Library Construction for Influenza A Virus and SARS-CoV-2: Systematic Comparison of rRNA Depletion Strategies and Fragmentation Orders. [PDF]
Sun Y +6 more
europepmc +1 more source
Microbial communities and functional diversity in seafood
Abstract Functional diversity encompasses ecosystem processes that enhance adaptability to environmental change. This study explores the diversity of microorganisms associated with seafood. In this paper, we present our knowledge of microbial diversity in relation to seafood.
Christian Larbi Ayisi +3 more
wiley +1 more source
The Microbiome of Nurdles: Life on the Primary Microplastics of the Texas Gulf Coast. [PDF]
Annaswamy V, Mikesh M, Dinkeloo K.
europepmc +1 more source
myo‐Inositol's role in laying hens’ active gastrointestinal microbiota: a strain comparison
Abstract BACKGROUND myo‐Inositol (MI) is a cyclitol involved in cellular metabolism and phytate degradation, yet its influence on the gastrointestinal tract (GIT) microbiota of laying hens remains poorly understood. This study investigated the effects of graded dietary MI supplementation on the active GIT microbial communities of two commercial laying ...
Naomi Sarpong +4 more
wiley +1 more source
Exploring the hypothetical role of <i>Bacteroides</i> species in depression progression: insights from metagenomic analysis. [PDF]
Li Z +7 more
europepmc +1 more source
Abstract BACKGROUND Ulcerative colitis (UC) is a relapsing inflammatory bowel disease characterised by oxidative stress, inflammation and regulated cell death of the colonic mucosa. Because live probiotics may cause bacteraemia and sepsis in immunocompromised hosts, non‐viable (paraprobiotic) alternatives have attracted interest.
Adem Yavaş, Ezgi Özkıran, Ecem Akan
wiley +1 more source
Correction to: Ghost-rocks' microbiota: metagenomic insights into their influence on the biogeochemistry of karstic cave and groundwater. [PDF]
europepmc +1 more source
Comparing Accuracy and Biases of DNA Metabarcoding, Hybridization Capture, and Metagenomic Sequencing for Quantifying Herbivore Diets. [PDF]
Eriksson CE +3 more
europepmc +1 more source
Iron/Manganese Oxide‐Bound Nitrogen Suppresses Microbial Mediated Nitrate Reduction in Soil
ABSTRACT Nitrogen cycling plays a pivotal role in sustaining ecosystem productivity and stability, while the chemical forms of nitrogen in soils critically influence both its efficiency and pathways. In this study, farmland soils from the Anning River Basin—an important watershed in Southwest China—were investigated to examine the regulatory effects of
Yu Cheng +3 more
wiley +1 more source

