Results 211 to 220 of about 173,492 (295)

pylifemap: Mapping data onto the tree of life

Methods in Ecology and Evolution, EarlyView.
Abstract The need to visualize data associated with NCBI Taxonomy Identifiers is growing in various biological fields ranging from comparative genomics to metagenomics and metabarcoding, and even for outreach. No tool today allows visualization of such data while still keeping the full vision of the whole taxonomy, possibly causing a biased view of the
Julien Barnier, Cassandra Bompard, Aurélie Siberchicot, Vincent Navratil, Joaquim Martin, Damien M. de Vienne   +5 more
wiley   +1 more source

Culture and Metagenomic Insights into the Ear Microbiota in Dogs with Healthy Ears and Otitis Externa. [PDF]

Vet Sci
Karakaya E, Satıcıoğlu İB, Yarım D, Güran Ö, Güran C, Alpman U, Atalan G, Abay S, Aydın F.   +8 more
europepmc   +1 more source

From short to long: The impact of read length on metagenome assembly and binning

Methods in Ecology and Evolution, EarlyView.
Abstract Metagenome sequencing not only plays a pivotal role in unravelling the genetic diversity and functional potential of microbial communities but also facilitates the discovery of genome context for microbial dark matter. This study presents a comparative analysis of metagenome sequencing strategies, focusing on the impact of read length on the ...
Xi Peng, Xingsheng Yang, Danrui Wang, Bo Zhao, Kai Feng, Qing He, Shang Wang, Ye Deng   +7 more
wiley   +1 more source

The grapevine microbiota: A review on the possible impacts of plant protection programs on phyllosphere microorganisms

Annals of Applied Biology, EarlyView.
This review highlights recent advances in understanding how plant protection programs and alternative fungicides affect the taxonomic composition of the grapevine phyllosphere microbiota. Bacterial and fungal communities are primarily shaped by the plant compartment, vineyard location, and sampling time. Plant protection programs generally have a minor
Sofia Montanari, Anna Smaldone, Veronica Castellari, Claudia M. O. Longa, Michael Oberhuber, Peter Robatscher, Michele Perazzolli   +6 more
wiley   +1 more source

Prey Partitioning in a Diverse Carnivore Community: Implications for Reintroduced Fishers in Washington

Animal Conservation, EarlyView.
Using fecal DNA metabarcoding, we quantified dietary overlap among reintroduced fishers and sympatric coyotes, bobcats, and Pacific martens in Washington's North Cascades. Niche overlap was substantial for common prey but varied with body size, revealing fine‐scale resource partitioning that may limit fishers' access to energetically efficient prey ...
Kayla A. Shively, Ellen M. Reese, Jason I. Ransom, Jeffrey C. Lewis, Tara Chestnut, David O. Werntz, Taal Levi, Laura R. Prugh   +7 more
wiley   +1 more source

Compositional and functional differences of gut microbiome and metabolome inform pathogenesis of cholestatic liver disease. [PDF]

Gut Microbes
Nikolaidis M, Hu C, Juran BD, McCauley BM, Schlicht EM, Bianchi JK, Ali AH, Tragaki V, Atkinson EJ, Johnson S, Mars RA, Eaton JE, Carey EJ, Franke A, Schramm C, Kashyap PC, Go YM, Tran V, Teeny S, Jones DP, Grant CW, Athreya AP, Miller GW, LaRusso NF, Gores GJ, Karlsen TH, Hov JR, Amoutzias GD, Lazaridis KN.   +28 more
europepmc   +1 more source

Effects of Live and Heat‐Treated Bifidobacterium longum CECT 7347 in Adults With Allergic Rhinitis: A Randomised, Double‐Blind, Placebo‐Controlled Trial

Allergy, EarlyView.
This randomized, double‐blind, placebo‐controlled trial evaluated the effects of live probiotic and HT postbiotic B. longum CECT 7347 in adults with moderate–severe allergic rhinitis. Postbiotic supplementation for 8 weeks significantly reduced CSMS and dSS, exceeding the established CSMS MCID with a 33% greater improvement, when compared to placebo ...
Ana Cardoso, Malwina Naghibi, Eric Climent, Andrea Rodenes‐Gavidia, Araceli Lamelas, Laura Llobregat, Juan Martínez‐Blanch, Daniel Friedman, Vineetha Vijayakumar, Richard Day   +9 more
wiley   +1 more source

Metagenomics [PDF]

, 2020
openaire   +1 more source

Longitudinal Follow‐Up of Gut and Salivary Microbiota in Children With Food Protein‐Induced Enterocolitis Syndrome

Allergy, EarlyView.
This study aimed to compare both the gut and salivary microbiota over time between allergic and tolerant patients and matched controls. Allergic patients with food protein‐induced enterocolitis syndrome exhibited lower gut and salivary alpha‐diversities, several genus‐level differences, and higher acetate levels than controls.
Anais Lemoine, Karine Adel‐Patient, Nathalie Kapel, Camille Mayeur, Marie‐Noelle Rossignol, Aurelia Bruneau, Patrick Tounian, Muriel Thomas, Ioannis Nicolis   +8 more
wiley   +1 more source