Results 21 to 30 of about 133,465 (266)
Challenges in benchmarking metagenomic profilers [PDF]
, 2021 Accurate microbial identification and abundance estimation are crucial for metagenomics analysis. Various methods for classification of metagenomic data and estimation of taxonomic profiles, broadly referred to as metagenomic profilers, have been ...
Shi Huang +23 more
core +1 more source
mSphere, 2019 Enteric viruses in the Caliciviridae family cause acute gastroenteritis in humans and animals, but the cellular processes needed for virus replication and disease remain unknown.
Alicia C. Strtak +5 more
doaj +1 more source
Cunningham: a BLAST Runtime Estimator [PDF]
, 2011 BLAST is arguably the single most important piece of software ever written for the biological sciences. It is the core of most bioinformatics workflows, being a critical component of genome homology searches and annotation.
Malcolm Matalka +5 more
core +1 more source
Metagenomics analysis of the morphological aspects and bacterial composition of broiler feces
Poultry Science, 2023 : In this descriptive study, we used metagenomics to analyze the relationship between the morphological aspects of chicken feces and its respective bacterial compositions.
Bauer O. Alvarenga +5 more
doaj +1 more source
Metagenomic analysis of microbial consortium GF-20 in corn stover degradation at low temperature
Journal of Environmental Engineering and Landscape Management, 2023 In our previous work, a microbial consortium GF-20 (Qinggeer et al., 2016) was enriched from compost habitats and adapted to efficiently and stably degrade corn stover under low temperatures.
Bi-zhou Zhang +7 more
doaj +1 more source
Biodiversity and distribution of polar freshwater DNA viruses [PDF]
, 2015 Viruses constitute the most abundant biological entities and a large reservoir of genetic diversity on Earth. Despite the recent surge in their study, our knowledge on their actual biodiversity and distribution remains sparse.
López-Bueno, Alberto +4 more
core +1 more source
mSphere, 2022 Metagenomic next-generation sequencing (mNGS) offers a hypothesis-free approach for pathogen detection, but its applicability in clinical diagnosis, in addition to other factors, remains limited due to complicated library construction.
Patrick Reteng +9 more
doaj +1 more source
A new method for extracting skin microbes allows metagenomic analysis of whole-deep skin [PDF]
, 2013 In the last decade, an extensive effort has been made to characterize the human microbiota, due to its clinical and economic interests. However, a metagenomic approach to the skin microbiota is hampered by the high proportion of host DNA that is ...
Francesc Calafell +15 more
core +1 more source
Frontiers in Microbiology, 2022 Sanitizing the water sources of local communities is important to control the spread of microbial resistance genes, especially those for water-borne illnesses.
Bahiyah Azli +8 more
doaj +1 more source
The Lung Microbiome of Three Young Brazilian Patients With Cystic Fibrosis Colonized by Fungi
Frontiers in Cellular and Infection Microbiology, 2020 Microbial communities infiltrate the respiratory tract of cystic fibrosis patients, where chronic colonization and infection lead to clinical decline.
Otávio Guilherme Gonçalves de Almeida +7 more
doaj +1 more source