Results 21 to 30 of about 140,210 (264)
WebCARMA: a web application for the functional and taxonomic classification of unassembled metagenomic reads [PDF]
, 2009 Gerlach W, Jünemann S, Tille F, Goesmann A, Stoye J. WebCARMA: a web application for the functional and taxonomic classification of unassembled metagenomic reads. BMC Bioinformatics.
Jünemann, Sebastian +14 more
core +1 more source
mSphere, 2019 Enteric viruses in the Caliciviridae family cause acute gastroenteritis in humans and animals, but the cellular processes needed for virus replication and disease remain unknown.
Alicia C. Strtak +5 more
doaj +1 more source
Seeing the forest for the genes: using metagenomics to infer the aggregated traits of microbial communities [PDF]
, 2014 Most environments harbor large numbers of microbial taxa with ecologies that remain poorly described and characterizing the functional capabilities of whole communities remains a key challenge in microbial ecology.
Daniel eLaughlin +8 more
core +1 more source
Metagenomics analysis of the morphological aspects and bacterial composition of broiler feces
Poultry Science, 2023 : In this descriptive study, we used metagenomics to analyze the relationship between the morphological aspects of chicken feces and its respective bacterial compositions.
Bauer O. Alvarenga +5 more
doaj +1 more source
Metagenomic analysis of a a southern maritime Antarctic soil [PDF]
, 2012 Our current understanding of Antarctic soils is derived from direct culture on selective media, biodiversity studies based on clone library construction and analysis, quantitative PCR amplification of specific gene sequences and the application of ...
David Anthony Pearce +41 more
core +1 more source
Metagenomic analysis of microbial consortium GF-20 in corn stover degradation at low temperature
Journal of Environmental Engineering and Landscape Management, 2023 In our previous work, a microbial consortium GF-20 (Qinggeer et al., 2016) was enriched from compost habitats and adapted to efficiently and stably degrade corn stover under low temperatures.
Bi-zhou Zhang +7 more
doaj +1 more source
mSphere, 2022 Metagenomic next-generation sequencing (mNGS) offers a hypothesis-free approach for pathogen detection, but its applicability in clinical diagnosis, in addition to other factors, remains limited due to complicated library construction.
Patrick Reteng +9 more
doaj +1 more source
Cunningham: a BLAST Runtime Estimator [PDF]
, 2011 BLAST is arguably the single most important piece of software ever written for the biological sciences. It is the core of most bioinformatics workflows, being a critical component of genome homology searches and annotation.
Malcolm Matalka +5 more
core +1 more source
Frontiers in Microbiology, 2022 Sanitizing the water sources of local communities is important to control the spread of microbial resistance genes, especially those for water-borne illnesses.
Bahiyah Azli +8 more
doaj +1 more source
A new method for extracting skin microbes allows metagenomic analysis of whole-deep skin [PDF]
, 2013 In the last decade, an extensive effort has been made to characterize the human microbiota, due to its clinical and economic interests. However, a metagenomic approach to the skin microbiota is hampered by the high proportion of host DNA that is ...
Francesc Calafell +18 more
core +1 more source