Results 91 to 100 of about 65,379 (150)

Effect of Probiotic Bacteria on the Gut Microbiome of Mice with Lipopolysaccharide-Induced Inflammation

Microorganisms
The role of lipopolysaccharide (LPS) in the development of diseases is clear, but the specific mechanisms remain poorly understood. This study aimed to investigate the microbiome aberrations in the guts of mice against the background of LPS, as well as ...
Mariya Gryaznova, Inna Burakova, Yuliya Smirnova, Polina Morozova, Egor Chirkin, Artem Gureev, Evgeny Mikhaylov, Olga Korneeva, Mikhail Syromyatnikov   +8 more
doaj   +1 more source

Comparative metagenomics using pan-metagenomic graphs

Abstract Identifying microbial genomic factors underlying human phenotypes is a key goal of microbiome research. Sequence graphs are a highly effective tool for genome comparisons because they enable high-resolution de novo analyses that capture and contextualize complex genomic variation.
Izaak Coleman, Natalya Mametyarova, Andrey Zaznaev, Peiwen Cai, Lisa Yu, Yoli Meydan, Aviya Litman, Ayushi Sharma, Lily He, Amanda Simkhovich, Dwayne Seeram, Heekuk Park, Yael R. Nobel, Aya Brown Kav, Itsik Pe’er, Anne-Catrin Uhlemann, Tal Korem   +16 more
openaire   +2 more sources

Fimsbactin Siderophores From a South African Marine Sponge Symbiont, Marinomonas sp. PE14‐40

Microbial Biotechnology
Low iron levels in marine habitats necessitate the production of structurally diverse siderophores by many marine bacterial species for iron acquisition.
Nompumelelo Philile Praiseworth Ikegwuoha, Thea Hanekom, Elzaan Booysen, Corbyn Jason, Shirley Parker‐Nance, Michael T. Davies‐Coleman, Leonardo Joaquim vanZyl, Marla Trindade   +7 more
doaj   +1 more source

Focus on Metagenomics [PDF]

Journal of Biomolecular Techniques : JBT, 2017
Christopher E, Mason, Scott, Tighe
openaire   +2 more sources

Conserved environmental adaptations of stream microbiomes in the hyporheic zone across North America

Microbiome
Background Stream hyporheic zones represent a unique ecosystem at the interface of stream water and surrounding sediments, characterized by high heterogeneity and accelerated biogeochemical activity.
Tom L. Stach, Jörn Starke, Feriel Bouderka, Till L. V. Bornemann, André R. Soares, Michael J. Wilkins, Amy E. Goldman, James C. Stegen, Mikayla A. Borton, Alexander J. Probst   +9 more
doaj   +1 more source

‘Metagenomics 2.0’ [PDF]

Environmental Microbiology Reports, 2015
openaire   +2 more sources

Deep Learning for Metagenomic Data: using 2D Embeddings and Convolutional Neural Networks

, 2017
Deep learning (DL) techniques have had unprecedented success when applied to images, waveforms, and texts to cite a few. In general, when the sample size (N) is much greater than the number of features (d), DL outperforms previous machine learning (ML ...
Chevaleyre, Yann, Nguyen, Thanh Hai, Prifti, Edi, Sokolovska, Nataliya, Zucker, Jean-Daniel   +4 more
core  

Toxic buffers used in microbial sample preservation for SEM can be replaced by PBS [PDF]

BIO Web of Conferences
Banas Indra, Kleber Noel, Soares André, Probst Alexander   +3 more
doaj   +1 more source

Bioprospecting soil metagenomes for potential new antibiotics : a thesis presented in partial fulfilment of the requirements for the degree of Master of Science in Genetics at Massey University, Albany, New Zealand [PDF]

, 2017
Hong, Kelly
core  

Visualizing microbial interactions and CRISPR-Cas interference using FISH applied to environmental archaeal biofilms [PDF]

BIO Web of Conferences
Banas Indra, Esser Sarah P., Moraru Cristina, Probst Alexander J.   +3 more
doaj   +1 more source