Identifying virulent avian paramyxovirus type-1: A paediatric case of progressive encephalitis diagnosed by clinical metagenomics with case series review. [PDF]
Brown JR +24 more
europepmc +1 more source
Microbial communities and functional diversity in seafood
Abstract Functional diversity encompasses ecosystem processes that enhance adaptability to environmental change. This study explores the diversity of microorganisms associated with seafood. In this paper, we present our knowledge of microbial diversity in relation to seafood.
Christian Larbi Ayisi +3 more
wiley +1 more source
Off-target metagenomics: Leveraging whole genome sequencing to study the bacteriome of the liverwort <i>Calasterella californica</i>. [PDF]
González-Ramírez IS +3 more
europepmc +1 more source
myo‐Inositol's role in laying hens’ active gastrointestinal microbiota: a strain comparison
Abstract BACKGROUND myo‐Inositol (MI) is a cyclitol involved in cellular metabolism and phytate degradation, yet its influence on the gastrointestinal tract (GIT) microbiota of laying hens remains poorly understood. This study investigated the effects of graded dietary MI supplementation on the active GIT microbial communities of two commercial laying ...
Naomi Sarpong +4 more
wiley +1 more source
Predicted meta-omics: A potential solution to multi-omics data scarcity in microbiome studies. [PDF]
Cosma BM +3 more
europepmc +1 more source
Iron/Manganese Oxide‐Bound Nitrogen Suppresses Microbial Mediated Nitrate Reduction in Soil
ABSTRACT Nitrogen cycling plays a pivotal role in sustaining ecosystem productivity and stability, while the chemical forms of nitrogen in soils critically influence both its efficiency and pathways. In this study, farmland soils from the Anning River Basin—an important watershed in Southwest China—were investigated to examine the regulatory effects of
Yu Cheng +3 more
wiley +1 more source
The mobile resistome in the water-soil-air nexus: horizontal gene transfer and environmental dissemination of antimicrobial resistance genes. [PDF]
Ong CJN +10 more
europepmc +1 more source
ABSTRACT Autotrophic carbon‐fixing bacteria (CFB) are central contributors to soil carbon sequestration and biogeochemical carbon cycling in agroforestry ecosystems and can act as reliable biological indicators for evaluating agroforestry ecosystem sustainability.
Jingying Hei +3 more
wiley +1 more source
Choosing Between Short-Read 16S, Full-Length ONT 16S, and Long-Read Shotgun Metagenomics for Soil Microbiome Studies: A Critical Review of the Benchmarking Evidence. [PDF]
Albastaki A, Smith J.
europepmc +1 more source
ABSTRACT Vegetation restoration has been widely used to curb desertification in northern and central desert shifting sandy lands of China. However, the general pattern, variability, and drivers of its effects on soil organic carbon (SOC) remain unclear.
Benmo Li +4 more
wiley +1 more source

