Results 201 to 210 of about 72,279 (314)

An Approach to Integrate Metagenomics, Metatranscriptomics and Metaproteomics Data in Public Data Resources

PROTEOMICS, EarlyView.
ABSTRACT The availability of public metaproteomics, metagenomics and metatranscriptomics data in public resources such as MGnify (for metagenomics/metatranscriptomics) and the PRIDE database (for metaproteomics), continues to increase. When these omics techniques are applied to the same samples, their integration offers new opportunities to understand ...
Shengbo Wang, Satwant Kaur, Benoit J. Kunath, Patrick May, Lorna Richardson, Alexander B. Rogers, Paul Wilmes, Robert D. Finn, Juan Antonio Vizcaíno   +8 more
wiley   +1 more source

Clinical implement of Probe-Capture Metagenomics in sepsis patients: A multicentre and prospective study. [PDF]

Clin Transl Med
Sun Q, Teng R, Shi Q, Liu Y, Cai X, Yang B, Cao Q, Shu C, Mei X, Zeng W, Hu B, Zhang J, Qiu H, Liu L.   +13 more
europepmc   +1 more source

An improved extraction protocol for metagenomic DNA from a soil of the Brazilian Atlantic Rainforest

, 2008
Jaime Henrique Amorim, T.N.S. Macena, Gileno Vieira Lacerda-Júnior, Rachel Passos Rezende, João Carlos Teixeira Dias, Martin Brendel, Júlio Cézar M. Cascardo   +6 more
openalex   +1 more source

WebCARMA: a web application for the functional and taxonomic classification of unassembled metagenomic reads [PDF]

, 2009
Wolfgang Gerlach, Sebastian Jünemann, Felix Tille, Alexander Goesmann, Jens Stoye   +4 more
openalex   +1 more source

A Non‐Metaproteomics Researchers’ View on Metaproteomics in Microbiome Research

PROTEOMICS, EarlyView.
ABSTRACT Metaproteomics, an emerging field among the omic techniques, holds great promise for unraveling the function of microbiomes in host health and our environment. Metaproteomics can also be a valuable addition to multiomics studies of the microbiome, complementing genome‐resolved metagenomics, metatranscriptomics, and metabolomics.
Velma T. E. Aho, Laure‐Alix Clerbaux, Anne Kupczok, Bree Tillett, Neha Garg, Jannie G. E. Henderickx   +5 more
wiley   +1 more source

Beyond clinical genomics: addressing critical gaps in One Health AMR surveillance. [PDF]

Front Microbiol
Vallejo-Espín D, Galarza-Mayorga J, Lalaleo L, Calero-Cáceres W.   +3 more
europepmc   +1 more source

The effect of sequencing errors on metagenomic gene prediction [PDF]

, 2009
Katharina J. Hoff
openalex   +1 more source

Metaproteomic Dataset on Semi‐Diurnal Variability of the Bacterioplankton Communities During a Spring Phytoplankton Bloom in the North Sea

PROTEOMICS, EarlyView.
ABSTRACT Phytoplankton blooms create a substrate‐rich environment that supports the growth of bacterial planktonic heterotrophs. Previously, we studied the dynamics of such bacterioplankton at a long‐term ecological research site near the coast of Helgoland Island (North Sea) once a day.
Vaikhari Kale, Jürgen Bartel, Daniel Bartosik, Philip Berhard Lude, Chandni Sidhu, Hanno Teeling, Rudolf Amann, Thomas Schweder, Dörte Becher, Anke Trautwein‐Schult   +9 more
wiley   +1 more source

Coupling culturomics and metagenomics sequencing to characterize the gut microbiome of patients with cancer treated with immune checkpoint inhibitors. [PDF]

Gut Pathog
Diop K, Mbaye B, Nili S, Filin A, Benlaifaoui M, Malo J, Renaud AS, Belkaid W, Hunter S, Messaoudene M, Lee KA, Elkrief A, Routy B.   +12 more
europepmc   +1 more source

Help from the past to cope with the future: Vitis sylvestris as a resource for abiotic stress resilience

PLANTS, PEOPLE, PLANET, EarlyView.
Viticulture is facing increasing challenges due to climate change. The focus on fast growth and sweet berries has come at the expense of stress resilience. Grafting onto Phylloxera‐resistant rootstocks from American species has been the most successful form of ecological pest management.
Samia Daldoul, Islam M. Khattab, Faouzia Hanzouli, Imane Bahlouli, Peter Nick, Ahmed Mliki, Mahmoud Gargouri   +6 more
wiley   +1 more source