Results 211 to 220 of about 130,645 (325)

Convergent evolution of metabolic functions: Evidence from the gut microbiomes of humans and dogs

iMetaOmics, EarlyView.
Dogs have undergone convergent evolution in their genome with humans in long‐term co‐living. Studies have shown that the gut microbiomes of dogs exhibit greater similarity to those of humans compared to mice and pigs. In our study, we first compared the gut microbiomes of macaques, three dog groups, and two wolf groups to those in humans.
Xiaoyang Wang, Lei Zhu, Yue Lan, Guimei Li, Tong Zhou, Qingguo Huang, Tifei Yuan, Chen Tian, Zhenxin Fan, Zhigang Zhang, Guo‐Dong Wang   +10 more
wiley   +1 more source

MeTAline: enabling reproducible and scalable metagenomic analyses. [PDF]

NAR Genom Bioinform
Khannous-Lleiffe O, Fuentes-Palacios D, Májer D, Gabaldón T.   +3 more
europepmc   +1 more source

Host–microbiota interaction drives 5‐hydroxyindole‐3‐acetic acid production to promote linear growth in infant mice

iMetaOmics, EarlyView.
This study discovered that Lactiplantibacillus plantarum Hi188 promoted linear growth in postweaning mice. Transcriptomic analysis, untargeted metabolomics, and in vitro experiments showed that the elevated levels of 5‐hydroxyindole‐3‐acetic acid (5‐HIAA) activated the hepatic aryl hydrocarbon receptor (AhR) and subsequently promoted insulin‐like ...
Yongmei Yang, Jing Yang, Weiyao Zhang, Linghao Zhou, Chenxu Zhu, Xuguang Zhang, Yuejian Mao, Meiling Zhang   +7 more
wiley   +1 more source

Small Bugs, Big Data: Metagenomics for Arthropod Biodiversity Monitoring. [PDF]

Ecol Evol
López Clinton S, Iwaszkiewicz-Eggebrecht E, Miraldo A, Goodsell R, Webster MT, Ronquist F, van der Valk T.   +6 more
europepmc   +1 more source

Artificial intelligence‐driven anticancer peptide discovery

iMetaOmics, EarlyView.
This review systematically summarized 68 artificial intelligence (AI) models for anticancer peptide (ACP) screening and presented a comprehensive AI‐based framework. The framework consists of six components: data collection and organization, feature extraction, model construction, interpretability analysis, experimental validation, and integration with
Junrui Wu, Shuaiqi Ji, Kashif Iqbal Sahibzada, Mengxue Lou, Feiyu An, Wenqian Li, Jiawei Guo, Taowei Zhang, Xinyi Zhang, Yilin Chou, Henan Zhang, Hao Jin, Teng Ma, Weichi Liu, Begali Alikulov, Natalia Alekseevna Golovneva, Hooi Ling Foo, Issayeva Kuralay, Zhihong Sun, Dongqing Wei, Rina Wu   +20 more
wiley   +1 more source

Bamdam: a post-mapping authentication toolkit for ancient metagenomics. [PDF]

Genome Biol
De Sanctis B, Mirchandani C, Dong H, Macleod R, Corbett-Detig R, Wang Y.   +5 more
europepmc   +1 more source

Weizmannia coagulans XY2 Mitigates Copper Neurotoxicity via Gut–Brain Axis Modulation of Tryptophan Metabolism and Oxidative‐Inflammatory Crosstalk

iMetaOmics, EarlyView.
Copper interferes with tryptophan metabolism and 5‐HT levels by modulating intestinal flora. Intestinal barrier breakdown and inflammatory response trigger nerve damage under copper exposure. W. coagulans XY2 alleviates copper‐induced neurotoxicity by targeting a multi‐dimensional “tryptophan metabolism‐antioxidant defense‐gut‐brain axis” network.
Yufang Gao, Xiaodong Zheng, Fujie Yan
wiley   +1 more source

Visualizing microbial interactions and CRISPR-Cas interference using FISH applied to environmental archaeal biofilms [PDF]

BIO Web of Conferences
Banas Indra, Esser Sarah P., Moraru Cristina, Probst Alexander J.   +3 more
doaj   +1 more source

Shotgun metagenomics on indoor air for surveillance of respiratory, enteric, and skin viruses in a Belgian daycare setting, January to December 2022. [PDF]

Euro Surveill
Karatas M, Geenen C, Keyaerts E, Budts L, Raymenants J, Eggers C, Craessaerts B, André E, Matthijnssens J.   +8 more
europepmc   +1 more source

MOMMY study profile: An integrative early‐life multi‐omics cohort in China

iMetaOmics, EarlyView.
MOMMY cohort (The MOther‐infant Microbiota transmission and its link to long terM health of babY) is a large, prospective birth cohort uniquely designed to investigate maternal‐paternal‐infant microbiota transmission and its impact on child health within the understudied Chinese population.
Lin Zhang, Yingzhi Liu, Shilan Wang, Jessica Yuet‐Ling Ching, Wing Hung Tam, Ting Fan Leung, Tak Yeung Leung, Paul K. S. Chan, Joyce W. Y. Mak, Chun Pan Cheung, Hein Min Tun, Eugene B. Chang, Orlando DeLeon, Qitao Huang, Xiaoqian Chen, Huiyi Huo, Yinglei Miao, Pui Kuan Cheong, Ka Long Ip, Yuk Ling Yeung, Mei Kam Chang, Chunmei Lyu, Hongju Yang, Bona Li, Yushuo Fan, Yang Sun, Suhua Jiang, Siew Chien Ng, Francis Ka Leung Chan   +28 more
wiley   +1 more source